Petromyzon marinus (sea lamprey): 116951640
Help
Entry
116951640 CDS
T09614
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04020
Calcium signaling pathway
pmrn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116951640
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116951640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116951640
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
Glutamate (ionotropic)
116951640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
116951640
NCBI-ProteinID:
XP_032826314
UniProt:
A0AAJ7TYB2
LinkDB
All DBs
Position
3:2903921..2976347
Genome browser
AA seq
1483 aa
AA seq
DB search
MFTSRAARSYREFTIRLSMGNAVVAVLMLLEILARNWDTVCEAKSTRPTVNITVIFGWSA
LGIPDILNTDDLSGIPVAINLKNKVLNETSPTGIINQLCSLVSSERMNGIVYGDDTSQEA
IAQILDFISSQTLLPIVGINGGASMVMSGKEMRSMFLQFGASVQQHSNILMRILEEYDWN
SFSIITSFYPGYHDFVNHIKHITINSYFGWEIQTIVSIDVKKDDDIAIRMQLKKVHTQVI
VLYCSRDEAEFLFHMANSVGLMGPGFVWLAAGLSVEDGEIIPLGFPIGLITVAFNDLDYS
FSQRMADSVAIIASAAQRTYQDYGHIPEAKTGCDSQPDEVPEENNIFYEYLMNVSWHDKD
LSFKRDGYLANPPMVVKVLNKKRTWEKVGMWEKDRLSLKYPLWPRYELSESTVMDDRHLS
VVTLEEKPFVIVEDVDPQTRMCMRNTVPCRQKIKLFSNMTNPSSSPYVKKCCKGFCIDIL
KKLSKTVKFTYDLYLVTNGKHGSKINGVWNGMIGEVVNMRAHMAVGSLTINEERSEVVDF
SVPFVETGISVMVPRSNGTVSPSAFLEPFSADVWVMMFILCLLVSGIAVFIFEYFSPVGY
NRQLSAGKEFGGPAFTIGKSIWLLWAIVFNNSVPVENPRGTTSKFMVSVWAFFAVIFLAS
YTANLAAFMIQEDYIDQVSGLSDKKFQSPLEHSPPFRFGTVPNGSTERNIRNNYLQMHGY
MSKFHQKSVEDALMSLKAGKLDAFIYDAAVLNYMAGKDEGCRLVTIGSGKVFVATGYGIA
LQKSSRWKRAIDLALLQFIGDGEMDELEMIWLTGICHGERNDVMSSQLDIDNMAGVFYML
LVAMGLSFIVFVCEHFFYHVGRHCVKNKENDEPGLLYSISRELYSCIYGIEISNRKKYMQ
SPKKRVMDTNSSIVRLLKTARSMANLTHINGSNSTPHRSSSNNERAPQPTHGMNGPYHRT
SINNSVLYNHNPSSHRSSLRETSFHESDAASQYRSNARLSSRGSFSLKEQEQIHPSVRAN
SVNTTIHEFGEAERNMARSRHASERPRDLAPGLRGMRRSASHAYIASQKMYKNGSELGRG
YVSDLEDIREHSPILRHDAYREKNVPYRKFDRNLRDGGRLPGRFSLKEKELYGMPPPRIM
TKYASMDWKDPKIFTRDAPNVLEPAAAAKKRSLFKRSDSFVEQEATMRSTSSIGSYFPQH
EECSGCRMKCHEVAPMSVHKGEPAHPSRSCPGHSKWYGNTHGGARHQCVGCKCPGIADKK
AAADHGERYIAERQKRPRGDDECSFSSFSSHNVHSAPPKESHHKHGYAPEYDKPAEMYSS
SAAAAAKGDFAEGKFGDTDGAESVRTMHCYRPGNSGDAEAGLQHGRHQPPECQPHKAFAD
SYPESLSSSYTDRGYLNTTNFGRRAAAADQAHNRHFPPINKSEGMGWVQKHNSAEEIQLC
NQDTVAKMPYFLSKTDGWTVPRPINSTCIRRVYSKLPSVESEV
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcacgagctgcacggtcttacagggaattcacaatacggttgagtatgggg
aatgctgttgtggctgttttaatgctacttgaaatcttagcacgaaactgggatacggtc
tgtgaagcgaagagtacacgtccaactgtaaatataactgttatcttcggctggagcgcg
ctgggcattccggacatactgaatacggacgacctctccggcatcccggtggcgatcaac
ctgaagaacaaagtactgaacgagacgagtcccactggcatcatcaaccagctatgcagc
ctggtgtcctcggagagaatgaacggaattgtgtacggtgacgacaccagccaagaagcc
atcgctcagattttggattttatatcgtcgcagacgttactgcccatagttggcattaac
ggtggcgcttccatggtcatgagcggaaaggagatgcggtcgatgtttttgcagtttgga
gcttcggtgcagcagcattccaacatcctgatgcgcattctggaggagtacgactggaac
agcttttccatcatcaccagcttctaccccggctaccacgactttgtcaatcacattaag
cacatcacaatcaacagctacttcggctgggaaattcagaccatcgtctccatcgacgtg
aagaaggacgacgacatcgccatccgcatgcaactgaagaaggtgcacacgcaggtcatc
gtgctgtactgctcgagggacgaagccgagttcctcttccacatggcaaacagcgtcggc
ctcatggggcctggcttcgtgtggctggccgctggcctgtcggtggaggacggcgaaatc
attcccctcggcttccccatcggtctcatcacggtcgcgttcaatgacctggactacagt
ttctcgcaacgcatggcggattcggtggccatcatcgcctcggctgcccagcgcacctac
caggattacggtcacatccccgaggcaaagacgggctgcgactcgcagcccgacgaggtg
ccagaagaaaacaatatattttacgagtatttgatgaatgtaagctggcacgataaagac
ctctcgtttaaacgcgacggctacctcgccaatcctcccatggtggtgaaagttctcaac
aaaaagcgcacgtgggagaaggtcgggatgtgggagaaggaccggctgtcgctgaaatac
cctctgtggccgcgctacgagctgtccgagtccacggtgatggacgaccgccacctgagc
gtggtgacactggaggagaagcccttcgtcatcgtggaggacgtggacccccaaacacgc
atgtgcatgcgcaacaccgtcccctgccgccagaagatcaagctgttcagtaatatgacc
aatccatcttcgagcccatacgtgaagaagtgctgcaaagggttctgcatcgacatcttg
aagaagctctccaaaaccgtgaaattcacttacgacctttacctggtcaccaacggcaag
cacgggagcaagatcaacggggtgtggaacggaatgattggcgaggtggtgaacatgcgg
gcccacatggccgttggatcgctcacgatcaacgaggaacgctcggaggtggtggacttc
tcggtcccgttcgtggagacgggcatcagcgtcatggtgcctcggagcaacgggaccgta
tcgccgtccgcgtttcttgagccgttcagtgccgacgtctgggtcatgatgttcatcttg
tgcttactcgtgtccggaatagccgtcttcatctttgaatacttcagtcccgttggctac
aatcgacagctgtcagccggaaaggaattcggagggccggcgttcaccattggcaagtcc
atctggcttctctgggccatcgtgttcaacaactcggtgccagtggagaacccgcgggga
accaccagcaagttcatggtctccgtttgggctttcttcgccgtaattttcctcgccagc
tacacggccaatttggcggccttcatgatccaggaggactacattgaccaggtttcaggt
ctcagcgacaaaaagttccaaagcccgctggaacattcaccgccgttccggtttggaact
gttccaaacggaagcacggagcgtaacattcgaaataattacctacaaatgcatggctac
atgtcaaagttccaccaaaagtccgtagaagatgctttaatgagcctgaaagcagggaag
ctcgatgcgttcatctacgacgcagcggtgctgaactatatggcggggaaggacgagggc
tgtcgcctcgtcaccattgggagtggaaaagtgttcgtggctacaggatatggcattgcc
ctgcagaagagttcccgttggaaaagagccatagatttggctctcctgcagtttatcggt
gacggcgaaatggacgaactggagatgatctggttgacgggcatctgccacggcgagagg
aacgacgtgatgagcagccagctggacatcgacaacatggcgggagtgttctacatgctg
ctcgtggccatgggcctgagcttcatcgtcttcgtgtgcgaacacttcttctaccacgtg
ggacgccactgcgtgaagaataaagagaacgacgagccgggcctcctctattccataagc
agggaattgtacagctgcatttacggaattgaaatttccaatcgaaagaaatacatgcag
tcgccgaagaagcgtgtgatggacacaaattcgagcatcgtgaggttactgaaaaccgcg
cgtagcatggccaacctgactcacatcaacgggagcaattccactcctcaccgcagcagc
agcaacaacgaacgggcaccccaaccgacccacggcatgaacgggccctaccacagaacg
tcgataaacaactcggtcctgtacaaccacaacccgtcttcgcaccgctccagcctgcgg
gagacgagctttcacgagagcgacgccgcgtcgcagtaccgctccaacgcgaggctgtca
tcgcgcggttccttttccctgaaggagcaggagcagatccacccctcggtccgggcaaac
tcggtcaacacgacgatccacgagttcggcgaggcggagcgcaacatggcgaggtctcgc
cacgcctccgagaggccccgggacctggccccgggcctgcggggcatgcggaggagcgcg
tcccatgcctacatcgcgtcgcagaaaatgtacaaaaacggatcggagctcggcaggggc
tacgtgtcggacctagaagacatacgggagcacagccccatcctgaggcacgacgcctac
agggagaagaacgtcccctacagaaagtttgatcggaacctgcgcgacggcggtcgactc
ccgggacgcttctcgctcaaggagaaagaactctacgggatgccgcccccgcgtataatg
accaaatatgcatccatggactggaaagacccaaagatattcacccgcgatgcccccaac
gtcctggaaccggcggcggcggcgaagaagaggtcactgttcaagcgaagcgacagcttc
gtcgagcaagaggccaccatgcgttctacctcctccatcggatcgtacttcccgcagcac
gaggagtgcagcggctgcaggatgaaatgccacgaggtcgcgccgatgagcgtgcacaag
ggggagccggctcacccgtcccggagctgcccgggccactccaagtggtacggcaacacg
cacggcggcgcgcgtcaccagtgcgtcggctgcaagtgccccggcatcgccgacaagaag
gccgcggcggaccacggggagcgctacatcgcggagcggcagaagcggccgcgcggcgac
gacgagtgctccttcagctcgttctcgtcgcacaacgtgcacagcgcgccgccgaaggag
tcccaccacaagcacggttacgcgcccgagtacgacaagccggcggagatgtactcctcc
tccgcggccgccgcggccaagggcgactttgcggaggggaagttcggagacaccgacggt
gccgagtcggtgcggacgatgcactgctaccggccgggcaactccggcgacgcggaggcg
gggctgcagcacggccgccaccagccgcccgagtgccagccgcacaaggcctttgcggat
tcgtaccccgaatccctgagctcgtcctacaccgaccggggttacttgaacacgactaac
ttcggtcgacgggcggccgccgctgatcaagcacacaacagacacttccctcccatcaat
aaatcagagggcatgggctgggttcaaaaacacaactcagcggaagaaattcaactttgt
aatcaagacacagttgccaaaatgccttattttctaagcaagactgatgggtggacagta
ccacgacccatcaatagtacttgcattagaagggtctacagcaagctgccaagtgtggaa
tcagaagtctga
DBGET
integrated database retrieval system
