Petromyzon marinus (sea lamprey): 116952927
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Entry
116952927 CDS
T09614
Symbol
HLCS
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn00780
Biotin metabolism
pmrn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
116952927 (HLCS)
Enzymes [BR:
pmrn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
116952927 (HLCS)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
116952927 (HLCS)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
116952927 (HLCS)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
116952927 (HLCS)
BRITE hierarchy
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_N
ABC_transp_aux
Motif
Other DBs
NCBI-GeneID:
116952927
NCBI-ProteinID:
XP_032828547
EnsemblRapid:
ENSPMAG00000002123
LinkDB
All DBs
Position
49:5297895..5314955
Genome browser
AA seq
978 aa
AA seq
DB search
MLLTACYVYLFFRMRRLAAAAAAAAAASSSSSSSSSSSLSSSSSPEAVLVALRRSVANSA
SLSLSSRPGSPPGAPARGDGGSGGQGRVCELVQPKVRVDVSGWIRTGAPRAPGADLVTFV
VEVRSPSAGAAPGGEAPQAGAAGLWSRCCVPLALRLGEPRRVLAEATEEAFARLGAAFLT
VGLQLDSGEEADSLISVDLEGFLCAEAGPPKVQLEISEDAVGCQVLHRHYPACSVGTRPK
GDPEVTFEPEVTATRLPRAQGAAEMDEPLSDARGAGCHVGEPRGVAATGGEHEDARPLHL
SSCCECLGLESSTIESVRSASMEDLVELPRDCDGDDDDDDDDDDRDRERTANAEPELRDA
PRADDREGPRVGRQSGSEDERLDGPGTEARGGTRARGHGSSNKPPNVLVYTGQDGPDADR
RFGLVCAALLSVLRPDHYTVYRLEEAPARAHPWPEHTRLLVLASPRPLPEETSERFLAYA
ARGGAVLALCSRASCGGVGVRRGGGQEEQGPRVAQPIRFQRGGDKPDVILSAPTDGVIVG
VGGDGAEVTAALEDAGCLEVWARLAGSGGEAVIVYQAYGEEGGAVVLCQVDLTGSLAGVE
GVLAADGQARCEVFTEILGHLGLNCGPGDAPTLTPAILWALEPRMKRSLLSALEPRLSES
GVLASRRVSLRFVRSLADGAGATPTLLPVVTEAAPDLLTPHFDLEAYRGMLRTRLLGRLV
LHCEVVGSTMELLDGVTPHLPDDVGLIAIATRQIRGKGRGGNAWLSPVGCAMFTLPLVVR
SDSCLGQHLPFLQHLVALAVVEGVRSAPGYEDIDLRVKWPNDIYYGSEFKVGGVLVNSTL
IGDTFQVLIGCGVNVSNDRPTWCVNAAVAEWNGARRAGDAPLAPMSTAGSIASTVTQLER
LVDSFQAGGPAAVLPLYYQRWLHSGTQVRLHSDTGPEATVLGLDDFGFLRVLSQDGTTLT
LQPDGNSFDMTRNLIVCK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcactgcctgctacgtctacctcttcttcaggatgcgacgtctcgctgctgct
gctgccgccgctgctgctgcctcctcctcctcctcgtcgtcctcctcctcctcgttgtcg
tcgtcgtcgtcgcccgaggcagtcctcgtcgccctgcgtcgctccgtggccaactcggcg
agcctctccctctcgtctcggcccggctccccgccgggagccccggcacgaggcgacggc
ggcagcggcgggcagggccgcgtgtgcgagctcgtacagcccaaggtgcgcgtcgatgtg
agcgggtggattcggaccggcgccccgcgggcccctggcgccgacctcgtcacgttcgtg
gtcgaggttcgctccccgtcggccggcgcggcccctggcggcgaggccccgcaggccggc
gcggcggggttgtggtctcggtgctgcgtgccgctggcgctgaggctcggcgagccgcgc
cgcgtcctcgccgaggccacggaggaggccttcgcgaggctgggagcggcgttcctcacc
gtcggactccagctcgactcgggggaggaggccgactcgctcatctccgtggacttagag
ggcttcctctgcgctgaagcgggccctcctaaagtgcaactcgaaatctctgaagatgct
gtcgggtgccaagtcttgcacaggcactacccagcgtgttctgttggaacgagaccaaaa
ggcgaccccgaggtgacctttgagcctgaggtcaccgcgactcgactgcccagagcccag
ggcgcggcggagatggacgagccgctcagcgatgcgagaggcgccggctgccacgtcggc
gagccgcgtggggtggcggcgacggggggggagcacgaggatgcccggcccctgcacctg
tcgagctgttgcgagtgcctcgggctggagagcagtactatcgagtccgtgcgctccgcc
tccatggaggacctcgtggagcttccgcgagactgcgacggcgatgacgacgacgacgac
gacgacgacgatcgcgaccgcgagcggactgccaacgcggagcccgagctccgggacgcg
cccagggcggacgaccgggaaggcccgcgggtcggccggcagagcggttcggaggacgag
cggctggacgggccgggaaccgaggcgcggggggggacgcgagcgcggggtcacgggtcg
tcgaacaagccgcccaacgtgctggtttacaccgggcaggacggacccgacgctgaccgc
aggttcgggctcgtgtgcgccgccctcctctcggtgctgcgccccgaccactacaccgtc
taccgtctcgaggaggcgccggctcgggcccacccgtggcccgagcacacgcggctgctg
gtgctggcgtcgccacggccgctgcccgaggagacgagcgagcggttcctcgcgtacgcg
gctcgcggcggcgccgtgctggcgctctgctcgcgcgcttcgtgcgggggcgtgggcgtg
cggcggggaggaggacaggaggagcagggcccacgcgtggcgcagccaatcaggttccag
aggggcggcgacaagcccgatgtcatccttagcgcacccaccgacggggtcatcgtgggg
gtcggaggtgacggcgcggaggtcacggccgccctggaggatgctgggtgcttggaggtc
tgggctcgattggccgggtctggaggggaagccgtgatcgtctaccaagcctatggggag
gagggcggcgccgtggttctctgccaggtcgacctgacgggctccttggccggagtcgag
ggggtcctggcggcagacggccaagcgcgctgcgaagttttcaccgagatcctgggccac
ctgggtttgaactgtggcccaggtgacgcgcccaccctcaccccggctatactgtgggcc
ctggagccgcgcatgaagcgttccctgctgagcgccctggagccccggctaagcgagtcc
ggggtgctggcgtcccgcagggtctccctccggttcgtgcgctcgctcgcggacggcgcc
ggcgccacgccgaccctgcttcccgtcgtcaccgaggcggcgcccgacctcctgaccccg
cacttcgacctggaggcgtaccgcgggatgctgcgcacacggctgctggggcggctggtg
ctgcactgcgaggtggtgggctccaccatggagctgcttgatggtgtgacccctcacctt
ccagacgatgtcggcctcatcgccatcgccacccggcagattcggggcaaaggccggggc
gggaacgcgtggctgagccccgtcggctgcgccatgttcacgctgccgctggtggtgcgc
tccgactcgtgcctggggcagcacctgccgttcctgcagcacctggtggccctggcggtg
gtggagggcgtgcgctcggcgccgggatacgaggacattgacttgagggtcaaatggcca
aatgacatttactatgggtcggagttcaaggtgggtggagtcctggtcaactccaccctc
attggagacaccttccaagtgctcattggttgcggcgtgaacgtgagtaacgatcgcccc
acgtggtgcgtgaacgccgccgtggcggaatggaacggagccaggagagcgggagatgcg
ccgctggctccgatgagcaccgccggatctatcgcgagcaccgtcacgcagctggagcgg
ctcgtggactcgttccaggcgggcggcccggctgccgtcctgccgctctactaccagcgc
tggctgcacagcgggacccaggtgcgactccacagcgacaccggaccggaggccacggtg
ctcggactcgacgactttggcttcctgcgcgtcctctcccaggacggcaccacgctcacc
ctgcagcccgacggcaactcgtttgacatgacgcgcaacctcatcgtgtgcaagtag
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