Petromyzon marinus (sea lamprey): 116955187
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Entry
116955187 CDS
T09614
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04020
Calcium signaling pathway
pmrn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116955187
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116955187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmrn04040
]
116955187
Ion channels [BR:
pmrn04040
]
Ligand-gated channels
Glutamate (ionotropic)
116955187
BRITE hierarchy
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
116955187
NCBI-ProteinID:
XP_032832090
EnsemblRapid:
ENSPMAG00000035691
LinkDB
All DBs
Position
58:5712204..5792575
Genome browser
AA seq
1473 aa
AA seq
DB search
MTSEAEAPLQRRRHRRHHHHHHRHLHLLLVLLFPRRSPIAMLTAAVTAWAVAVATLPAAA
EARGAPRAHGGGRGGGSRQGYPVLNIAVIYAGRSSQLLDVKHVLSGGQFLDMPMDVNVAV
TRTVNGTNPRDVIIQICDVLSSVRLHGVVFGDETEREALAQILDFISSQTLIPIIGIRGG
SAVVMTKKEEESIFLQFGATVQQQSRVIMRIMEEYDWHSFSVVTSHYTGYQDFIYHLHIT
VESSYVGWHLDRIIPLDLLDRDSDDQIKAKLRSIQTQVVVLYCSMAEAEYLFRVAETVGL
TGFGYVWIVPGLRWSESERRPPGHFPTGMVTISYDDERRGLAHRAMEGVAVVATAAFNMF
VEFGFIPESKLNCNNTNAFNSSLWSTFYRCLRNITWRGRDLSFNSNGYLEKPSMTVMALN
NERVWEKVGKWENEMLALKYPIWPRFGKPPSGADDRHLSVATLEEEPFVIVEDIDAVMGN
CLRNTVPCRQQTRNIGNLTDTGSYIKRCCKGFCIDILKKLAKGVGFTFDLYLVSNGKHGK
MVQGLWNGMVGEVLYKRADIAIGSLTINEERQEVIDFSVPFVETGISVMVSISNGTVSPS
AFLEPYSAAVWVMMFVLCLSVVAIAVFVFEYISPKSYDRNLANGATPGGPSFTIGKCVWL
LWALVFNNSVPVENPRGTSSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDQVSGLSD
KKFQKPTEQYPPLRFGTVPNGSTERNIRNNYPEMHAYMSRYNQRTVEDALLNLKASKLDA
FIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKGSKWKRNIDLTVLQLLGDDE
LEELETIWLAGICKKEKNEVMSSKLDVDNMAGVFYMLLVAMGLSLLVFLAEHIFYRRVGR
AGRKASINPTPRILLAISRGIYSCLYGVEVSKDKGLFALAQQESQDEHANVNRLLRAARS
IVRIVNRKKRSEQRAKAAAAATGSVGGGSSRGLAAPCGSCGCCERGPLARAAHGGRRGPA
AIILKRHGLSDGGRAAYSVRGPGGGPCPLHRDCRRSAPKPLPLPVPLLAPDAVGGPHSPR
LVVALGPDAWPRSLGADGGCSTNHDRRSHSNWETDSDNWLFITRSPRGTAASAGTGGFGD
SPSSAVGASDAADGAVPVWNCPLHGFAMPPRPPPLPAPPQPLPLDPTRGPWGPGGGGGWG
VGLPHAGESLPSRSLEELRGGPESPGDADVDLIPEKARRRPLCRRKRKSRLQGHRRRALS
PPFCPAAKRASRTGCQGVGAGVGAGVGAVGAAAAAVPYNPRDSSSFERYGRPSVESYDLD
DDCDDDEGDEDVESFSERDSYTASESLYGLSPPGGGHWYADSERSTYCERRSDNRGRRPQ
LQPRRERRYGRPPAPAAAVHHRGRTFLDGLRGWVFETEAPGGGSVQGGCGGGGDGGALAY
GGPETTPNSAARFPHAQGQIEIYAYDSVGLRRR
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaggcggaggcaccgctacaacgccgccgtcaccgccgccaccaccaccac
caccaccgccacctccacctcctcctcgtcctcctcttcccccgccgctcgccgatcgcg
atgctcaccgcggccgtgactgcgtgggccgtggccgtggcgactctcccggccgcggcc
gaagctcgcggagccccgcgtgctcacggcggcggccgagggggtggctcccggcagggc
tacccggtgctcaacatcgccgtgatctacgcgggccgctcctcgcagctgctcgacgtg
aagcacgtgctgagcggcgggcagttcctcgacatgcccatggacgtgaacgtggcggtg
acgcgcacggtgaacggcacgaatccgcgggacgtgatcatccagatctgcgacgtgctg
tcgagcgtgcggctccacggggtcgttttcggcgacgagaccgagagggaggcgctcgcc
cagatcctcgacttcatctcctcgcagacgctcatccccatcatcggtatccgaggaggc
tcggccgtggtcatgactaaaaaggaggaggagtcgatcttcctgcagttcggtgccact
gtgcagcagcagtcgcgcgtcatcatgcgcatcatggaggaatacgactggcacagcttc
tcggtggtcacgtcacactacaccgggtaccaggacttcatctaccacctgcacatcacc
gtggagagcagctacgtaggctggcacctcgaccgcatcatccccctcgacctactcgac
cgcgacagcgacgaccagatcaaggcgaagctgcgcagcattcagacgcaggtggtcgtt
ctctactgctcgatggccgaggccgagtacctgttccgcgtcgccgagaccgtgggactc
actggcttcggttacgtgtggattgtgccgggactgcgttggtccgagtcggagagacgt
cccccgggacacttcccgacgggcatggtgaccatctcgtacgacgacgagcggcggggg
ctcgcgcatcgcgccatggaaggggtggccgtcgtggccacggccgccttcaacatgttc
gtcgagttcggcttcatccccgagtcgaagctcaactgcaacaacaccaacgccttcaac
agctctctgtggagcaccttctacaggtgcctgcggaacatcacgtggagaggcagggac
ctgtccttcaacagcaacggctacctggagaagccgtcgatgacggtgatggccctcaac
aacgagcgcgtatgggagaaggtcggcaagtgggagaacgagatgctggcgctcaagtac
ccgatctggccgcggttcggaaagcctccgtcgggcgccgacgatcgccacctgagcgtg
gcgaccctcgaagaggagcccttcgtcatcgtggaagacatcgacgccgtcatgggcaac
tgcctgcgcaacaccgttccctgccgccagcagacgcgcaacatcgggaacctgaccgac
actggctcctacatcaagcgctgctgcaagggcttctgcatcgacatcctcaagaagctc
gccaagggagtggggttcaccttcgacctctacctcgtgtccaacggaaagcacggcaag
atggtgcagggcctgtggaacggcatggtcggagaggtgctgtacaaacgggcggacatt
gccatcggctcgctcaccatcaacgaggagcgccaggaggtcatcgacttctcggtgccc
ttcgtcgagacgggcatcagcgtcatggtgtccatctccaatggaaccgtgtcgccctcc
gccttcctggaaccctacagtgctgccgtgtgggtcatgatgttcgtgctgtgcctctcc
gtcgtggccatcgctgtcttcgtgtttgagtacatcagccccaagagctacgatcgcaac
ttggccaacggagccactccgggaggaccgtcgttcaccatcggcaagtgcgtgtggctc
ctgtgggcgctcgtgttcaacaactcggtgcccgtggagaacccgcgaggcacctccagc
aagatcatggtgctcgtgtgggccttcttcgccgtgatcttcctcgccagctacacggcc
aacctggccgccttcatgatccaggaggagtacatcgaccaggtgtcgggtctcagtgac
aagaagttccagaagcccacggagcagtacccgccgctgcgcttcggcacggtgcccaac
ggcagcacggagcggaacatccgcaacaactaccccgagatgcacgcgtacatgtcgcgc
tacaaccagcgcaccgtcgaggacgccctgctcaacctcaaggccagcaagctggatgcg
ttcatctacgatgccgcggtgctcaactacatggcgggcaaggatgagggctgcaagctg
gtgaccatcggcagcggcaaggtcttcgccaccacgggctatggcatcgcgctccagaag
ggctccaagtggaagcgcaacatcgacctcaccgtgctgcagttgctgggtgatgatgag
ctggaggagctggagaccatctggctggcaggcatctgcaagaaggagaagaacgaggtg
atgagcagcaagctagacgtggacaacatggcgggcgttttctacatgctgctggtggcc
atgggcctcagtctgctcgtcttcctcgccgagcacatcttctaccggcgtgtgggccgt
gcgggccgcaaggcctccatcaaccccacgccacgcattctgctcgctattagcaggggc
atctacagctgcctgtacggcgtggaggtgagcaaggacaaggggctatttgcgctggcg
cagcaggagagccaggacgagcatgccaacgtcaaccgcctgctgcgcgccgcccgcagc
atcgtccgcatcgtcaaccgcaagaagcgcagcgagcagcgggccaaggcggccgcggcg
gcaaccgggagcgtcgggggcggctcctcgcgggggctcgccgcgccgtgcggctcgtgc
ggctgctgcgagcgcgggccgctggcaagagccgcccacgggggccgccgaggcccggcc
gccatcatcctcaagaggcacgggctctccgacggcggccgggccgcgtacagcgttcgc
ggcccgggcggggggccctgcccgttgcaccgcgactgccggcgcagcgcccccaagccg
ctgccgctgccggtaccactgctggcgcccgatgcggtcggcgggccgcacagcccacgg
ctcgtggtggcgctggggcccgatgcgtggccccgctcgctcggcgctgacggcggttgc
tcgaccaaccacgaccggcgctcgcacagcaactgggagacggacagtgacaactggttg
tttatcacacgcagcccacgaggaaccgccgcctccgccggcacgggcggcttcggcgat
tcgccgagttcggcggtcggcgcctcggacgccgcggatggcgccgtccccgtgtggaac
tgcccgctgcacggcttcgcgatgccgccgcggccgcccccgttgccggcgccacctcag
cccctgccgctggacccgacgcgcgggccgtgggggcccggcggcggcggcggctggggc
gtcggcctcccacacgcgggcgagtcgttgccgtcgcgcagcctggaggagctgcgcggc
ggccccgagtcgccgggcgacgccgacgttgacctcatccccgagaaggcgcggcggcgg
ccgctgtgccggcgcaagcggaagagccgcctacaggggcacaggcggcgagcgctgtcc
ccgccgttttgcccggcggccaagcgagcgagcaggacaggctgccaaggcgtcggcgcc
ggcgtcggcgccggcgtcggcgccgtcggcgccgcggcagcggcggtgccgtacaacccg
cgcgacagctcgtcgttcgagcgctacggccgcccgtcggtggagagttacgacctcgac
gacgactgcgatgacgacgagggcgacgaggacgtggagtcgttctcggagcgcgactcg
tacacggcgtccgagtcgctgtacgggctgtcgccgccgggcggcggccactggtacgcc
gactcggagcgcagcacgtactgcgagcggcgaagcgacaaccgcggacgacgccctcag
ctgcagccccgccgggagcggcggtacggccggccaccagcaccggccgccgccgtacac
caccgtggacggacgttcctggatgggctacggggctgggttttcgagacggaggcaccc
ggcggaggttcagtgcagggcggctgcggtggcggcggtgacggcggcgccctggcatac
ggcggaccagagacaacaccgaactctgccgcgcgatttccccacgcacaaggacaaatc
gagatctatgcatacgactctgttgggctacgacgacgttag
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