Pseudomonas mucidolens: NCTC8068_05081
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Entry
NCTC8068_05081 CDS
T08935
Symbol
rsmD
Name
(GenBank) RsmD family RNA methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmud03009
]
NCTC8068_05081 (rsmD)
Enzymes [BR:
pmud01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
NCTC8068_05081 (rsmD)
Ribosome biogenesis [BR:
pmud03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NCTC8068_05081 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
N6_Mtase
MethyltransfD12
Methyltransf_31
UPF0020
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
SQH37132
LinkDB
All DBs
Position
1:5477323..5477928
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AA seq
201 aa
AA seq
DB search
MASPSRPKKPVHNVHNGVGQLRIIGGEWRSRKLSFPDVVGLRPTPDRVRETLFNWLAPYI
AGAKVLDPFAGSGALFLEALSRGAALGQALDASNVAVSSLREHLGTLRCTTGQVQTADAL
RYLETQPASAFDVVFLDPPFNQNLLPSVCALLEERQWLADDAWIYTESETAPSALGLPAS
WRLHREQKSGRVYYALWQRTL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggctagtccatcgcgtcccaaaaaacctgtccacaacgtgcacaatggcgtgggtcaa
ctgcgcatcattggcggcgaatggcgcagccgcaagctgagcttcccggacgtcgtgggc
ctgcgtccgacgccggaccgggtccgcgagaccttgttcaactggctcgcaccgtacatt
gccggggccaaggtgctcgatccgttcgccggcagcggcgcgctgttcctcgaggccctg
tcccgtggcgcggccttgggccaggcgctggatgccagcaatgtcgcggtgtccagcttg
cgtgaacacttgggcacgctgcgttgcaccaccggccaggtacagaccgctgacgctttg
cgctatctggaaacccaaccggccagcgcattcgacgtggtgttcctcgacccgccgttc
aatcagaacctgttgccgagcgtttgcgccctgctcgaggaacgtcagtggctggccgat
gacgcgtggatctacaccgagagcgaaaccgcgccgtcggcgctgggcctgcccgcaagc
tggcgcctgcaccgggaacagaaatccgggcgcgtgtattacgcgttgtggcaacgtacg
ttgtag
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integrated database retrieval system
