Prunus mume (Japanese apricot): 103321801
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Entry
103321801 CDS
T03196
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103321801
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103321801
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
103321801
NCBI-ProteinID:
XP_008221862
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Position
LG2:18658967..18661626
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AA seq
470 aa
AA seq
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MKRSKNLSSLLFLFFIAFLSFLIASVEARKNHTKKSKPHKHHQGKGATSGNNTHNSHLPG
PAPAPPQPQQSTVFPILSFGAKGDGVSDDSKALVAAWEAACRVKGATVEIPSGFKFLIQP
ITLDGSGCMPDLVLQIDGTLLAPSKASTWPESSLFQWINFKYARNFTIQGTGIVDGQGSD
WWNSSAHKRSEHTSDTKPTALRFYCSSDVTVRNIKIINSPQCHLKFDSSSWIKVNNITIT
SPDYSPNTDGIHLQNTQNVEIHHSTIGCGDDCVSIQTGCSNVHIHHIKCGPGHGISLGGL
GKAESLACVSNIIVNNILFQNTQSGVRIKTWPGGKGSVKNVSFSNIQVSNVGVPIVIDQN
YCDNMKKHLCQNQTRGAVAISGVKYDNIIGNYSKEPIRLACSNDTPCTDVDLIDIQLKPT
TGDPRSLRSDLCRNSYGKSKAPLLPSVIDYCLRRDGGQVKHIARSLEKMC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagcaaaaatttatcttctctacttttcttgttttttattgcgtttctgtca
tttcttatagcttcagttgaggcaagaaaaaatcataccaagaagagcaaaccacataaa
catcatcaaggaaagggtgccaccagtggcaataacactcataattcacatttgcctggc
cctgctccagcccctcctcaaccccaacagtctaccgttttccccatcttgtcatttggt
gccaagggtgatggagtctccgatgattcgaaggcacttgtagcagcatgggaagcggcc
tgcagggttaaaggggcaactgtggaaatcccttcaggattcaagttcctcatccagcct
ataactcttgatggcagcggttgtatgcctgaccttgttcttcagatagatggaactctc
ttggctccttcaaaagcaagtacctggccagaatccagtttgttccaatggataaacttc
aaatacgctcgtaacttcaccatccagggcactggcattgttgatggccagggctctgac
tggtggaattcatctgcgcataagaggtccgagcacacttcagatacgaaacccactgct
ttgagattctattgtagctcagatgtcacagttcgaaacatcaaaatcataaacagccct
cagtgccacttaaaatttgacagctcttcatggatcaaagtgaacaacattaccatcact
tcaccagattatagcccaaatacagacggcattcacttgcagaacacacaaaacgtggaa
attcaccattctactattggctgtggagatgactgtgtatccatacaaacaggatgctct
aacgttcatattcatcatattaaatgtggccctggccatggcataagtctaggaggactc
ggaaaagccgaaagtctagcttgtgtctcaaacatcatcgtgaacaacattttatttcag
aatactcaatcaggagttaggatcaagacttggccgggaggaaaagggtccgtgaagaat
gtatcattctccaacatccaggtttccaatgtgggggttcctatagtgatagaccaaaac
tattgtgacaacatgaagaagcatttgtgccagaaccaaactagaggagctgtggcaatc
tcaggtgttaaatacgataatataattgggaattattcaaaggagccaattcgtctagct
tgtagcaatgacactccatgcacagatgtggatcttattgatatccagcttaaacctaca
accggggacccgagatcacttcgatccgatttgtgtcgaaactcttatgggaagtctaaa
gctcccttgcttccttcagtcatagactactgcttgagaagggatgggggtcaagtcaag
catatagcaaggtcgcttgagaagatgtgttag
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