Prunus mume (Japanese apricot): 103326613
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Entry
103326613 CDS
T03196
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103326613
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103326613
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
EAD10
Motif
Other DBs
NCBI-GeneID:
103326613
NCBI-ProteinID:
XP_008227080
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Position
LG3:15002852..15004579
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AA seq
400 aa
AA seq
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MGSKFVQFVCLVFLLVSIVKVGAQPAVFDVMNHGGVADGKTDNSKVFTDAWNQACQNNGG
GVVLFPTGTYFVEPVVLYGGCKGPIGVQIEGTLLAPEELESSVDIDHWIAFQYVDNLVIN
GGGSLDGQGPSAWPFNDCLKNPQCKRLPTSLRLDFVTNASIDRITSINSKNVHINIFASQ
NITISNIKISAPGDSPNTDGIHLGSSHNIQILDSVIATGDDCISFSTGTNNVNISGVRCG
PGHGISIGSLGKVDGDDVSFVDIRNCSFVGTQNGVRVKTWAPSEAGTVSHLNVENIEMDN
VENPIIIDQQYCPSRSCNAEEFSKVQIKDVKFKNIWGTSSTKYVVTLKCSQTSPCQEIEL
TDINLNYNGLEGSGVSACSNVEVEAYGQQTPPACTEKIIM
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggctccaaatttgtgcaatttgtttgcctagtgttcttgctagtatccattgtcaaa
gttggagctcagccagcagtttttgatgtgatgaatcacggcggcgttgcggatggaaaa
actgataacagcaaggttttcactgatgcatggaatcaagcttgccaaaacaatggaggt
ggtgtggtcttatttccaactgggacatactttgtggaaccagtggttttgtatggggga
tgcaagggaccaattggggtgcagatagaggggaccctactggctcccgaggagctggaa
tcttcggttgatatcgaccattggatcgccttccaatacgttgataacttggtaatcaat
ggtggtggttcacttgatggacaaggaccctctgcttggcccttcaacgactgcttgaaa
aatccacagtgcaagcgacttcctacttcattgcgattggatttcgtcactaatgcaagc
atagatcgcataacctcgatcaacagcaagaacgtgcacatcaacattttcgcatcccaa
aacataacaattagcaacatcaagatatcagctcccggggacagccccaacaccgacggc
atccaccttggttcatcacacaacatccagatcttggactcggtgatcgccactggcgac
gattgcatatcctttagcaccggaacaaacaacgtgaacattagcggcgttcgctgtgga
ccgggccatggaatcagcattggaagccttggcaaggttgatggtgacgatgtttcattc
gtggatataagaaactgcagtttcgtcggcactcaaaatggagtgagagtcaaaacatgg
gctccctctgaagcaggcacagtttcacatcttaacgttgagaacattgaaatggataat
gtcgaaaaccctatcatcatcgatcaacagtattgcccttctcgtagttgcaatgcagag
gaattctccaaagttcagattaaagatgttaagtttaaaaacatttggggaacttcaagc
acaaaatatgttgttactctcaaatgtagccaaacttcaccctgccaggagattgagctc
acggacatcaacctaaattacaatggtcttgaaggatcgggtgtatcagcatgctcaaac
gtagaagttgaagcttatggccaacaaacaccccctgcttgcacagaaaagataattatg
taa
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