Prunus mume (Japanese apricot): 103326776
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Entry
103326776 CDS
T03196
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00240
Pyrimidine metabolism
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
103326776
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
103326776
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Uma2
Motif
Other DBs
NCBI-GeneID:
103326776
NCBI-ProteinID:
XP_008227236
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Position
LG3:17160786..17167751
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AA seq
343 aa
AA seq
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MASSSSALSRLSNLHGHLHPSHSNKGGVGFIKISPEVSEALSNDHAVVALESTIISHGMP
YPKNLETAREVEAVVRENGAVPATIAILDGIPCVGLSMEELEKLANLGPRAQKTARRDIA
HVVATRGNGATTVSATMFFASMVGIPLFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAV
ISAGVKSILDVPRTLEYLETQGVCVAAYRTNEFPSFFSETSGCKVPCRVDTPEDCAQLID
ANLKLELGTGILIAVPIPKEHAASGRLIESAIKRALEEARDKNIIGNAATPFLLARVNEL
TGGASLASNIALVKNNALVGAKISVALAQVKERENKGGVKTTL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttcttcggctctctcaagactctctaatctccacggacacttgcatccc
tcgcactcaaataagggtggtgtggggtttatcaagatttctccagaggtttctgaagct
ttgtcaaatgaccatgctgttgttgctcttgaatccaccattatttcccatgggatgccc
tatcctaagaacttggaaactgcaagggaagttgaggcagttgtgagggaaaatggagct
gttcctgccacgattgctattttggatggcataccttgcgtaggtctgagtatggaagaa
ctggagaagcttgccaatctcggacccagagctcagaagacagctcgaagagacatcgca
catgttgtggcaaccagagggaatggagcaactactgtttctgcaaccatgttttttgct
tctatggttggcataccattgtttgttactggagggattggaggagtacatagacatggg
gagcatacaatggacatatcttctgatcttactgagcttggaaggacaccagtagctgtc
atctctgctggtgtaaaatcaatattggatgtcccaaggacccttgaatatttggaaact
cagggagtttgtgttgctgcttataggaccaatgaatttccatcatttttctctgaaaca
agtggttgcaaggtgccttgccgtgtagataccccagaagactgtgctcagcttatagat
gcgaacctgaaacttgagcttggaactggaattttgattgctgttccaattcccaaagag
cacgcagcttctggaaggttaattgagtctgcaatcaagagagctcttgaagaagctagg
gataagaacataattggaaatgctgcaactccatttttgcttgcgagagttaatgaatta
actggaggagcttctctggcttcgaacattgcactggtgaagaacaatgcacttgttggt
gctaaaatttccgtagcacttgcgcaggttaaagaacgtgaaaataaaggtggtgtgaag
acaacgctatag
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