Prunus mume (Japanese apricot): 103331101
Help
Entry
103331101 CDS
T03196
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum02010
ABC transporters
pmum04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103331101
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
103331101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103331101
Enzymes [BR:
pmum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
103331101
Transporters [BR:
pmum02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
103331101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_29
AAA_21
AAA_23
SMC_N
AAA_16
nSTAND1
DUF1622
Motif
Other DBs
NCBI-GeneID:
103331101
NCBI-ProteinID:
XP_008231933
LinkDB
All DBs
Position
LG5:complement(7737763..7756740)
Genome browser
AA seq
978 aa
AA seq
DB search
MPSLQLLQLTEHGRSFMASRRKTLLLATGIVVAGGTAAYVQSRLNHKKHDSLGYYNGLND
NEETTEKVVMNDHKLKKPPRKKGGLKSLQVLAAILLSEMGQMGVRDLLALVSIVVLRTAL
SNRLAKVQGFLFRAAFLRRVPLFLRLISENILLCFLVSTMHSTSKYITGTLSLRFRKILT
KLIHSHYFENIAYYKMSHVDGRITNPEQRIASDVPKFCSELSEIVQDDLTAVTDGLLYTW
RLCSYASPKYVFWILAYVIGAGATIRNFSPAFGKLMSKEQQLEGEYRQLHSRLRTHAESV
AFYGGESREEFHIKKKFETLIGHMRVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFS
GHLRPDTSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELLAIS
RELSVVNGKSSGSRNCFSEADYIEFAGVKVVTPTGNVLVDNLSLRVESGSNLLITGPNGS
GKSSLFRVLGGLWPLVSGHIVKPGVGTDLNKEIFYVPQRPYTAVGTLRDQLIYPLTVDQE
VEPLTHSGMVELLRNVDLEYLLDRYPPEKEINWGDELSLGEQQRLGMARLFYHKPKFAIL
DECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVQFKREDS
PLLNEGGGNMMLSETTRQSDAMTVQRAFATTRKDSTISNSKAQSYIGEVIAVSPSEDHNV
THPFVPQLQRDPRALPLRVAAMFKVLIPTVLDKQGAQLLAVAFLVVSRTWISDRIASLNG
TTVKFVLEQDKAAFIRLIGVSVLQSAASSFIAPSLRHLTARLALGWRIRLTQHLLKNYLR
NNAFYKVAILKCEKSSEHTNILDMRLRTILENVRLSYLLEREEGGWDANLNWEDTLSLGE
QQRLGMARLFFHKPKFAILDECTNATSVDVEEQLYRLAKDMGITVVTSSQRPALIPFHAL
ELRLIDGEGNWELRSIKQ
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcttcagctgctgcaattaactgagcatggccggagtttcatggcgtcgagg
aggaaaactttactacttgccactggtatcgtggttgctggtgggactgctgcatatgtt
caatcacggttaaaccataaaaagcatgattctcttggttattataatgggctgaatgat
aatgaagaaacaacggagaaggtcgtgatgaatgatcataagttaaagaaacctccacga
aagaaagggggattgaagtcgcttcaagttcttgctgcaattctcttatctgagatgggc
caaatgggtgtgagggatcttttagctttagtctctatagtggtgttgcgaactgctttg
agcaacaggctagcaaaagttcaaggatttttattccgtgcagctttccttcgacgcgtg
ccattatttcttcgactgatctctgaaaatattttattatgttttcttgtatcaaccatg
cattctacttcaaagtatatcacagggaccttaagtctgcggttcagaaaaatattgaca
aaacttattcattcccattattttgagaatatcgcatactacaaaatgtctcatgtcgat
ggtcggataactaatcctgaacaaagaattgcaagtgatgtgccaaagttctgttcagag
ttgagtgaaattgtacaggatgatttgacagctgtcactgatggtttgctttatacttgg
cggctgtgttcttacgccagtcctaaatatgttttctggatattggcatatgtaatagga
gcaggggccacgataagaaatttttctcctgcttttgggaaactaatgtccaaagaacaa
caattggaaggggagtaccgacaacttcattcacgattaaggacacatgcagaaagtgtg
gcattttatggtggagaaagtagggaagaatttcatattaagaagaagtttgaaactctg
attgggcatatgcgtgttgtccttcatgaccattggtggtttggcatgattcaagatttt
ttattgaaatatcttggtgctacagtggctgttatactgattattgagcccttcttctca
ggccatctgaggcctgacacttcaactttaggccgcgcggagatgttaagcaatttaaga
tatcatactagtgtcataatttcactatttcagtctttgggaactctttctataagttca
aggcggcttaatcgtctcagtggttatgctgatcgcattcatgaattattggccatatca
agagagctaagtgtggtcaatggtaaatcttctgggagcagaaattgctttagtgaggct
gattacattgaatttgctggtgtcaaggttgttacccccacgggtaatgttttggtggat
aatttgtcacttagggtcgaatcaggatctaatcttttgattacaggtccaaatggtagc
gggaagagctcacttttccgagttctaggaggtctctggcccttggtatctggccatatt
gtgaaacctggtgttggtactgatctcaataaagaaattttctatgtaccacaaagacca
tacacagctgttggaacacttcgggaccagttgatttatcctcttactgtagatcaagag
gttgaaccacttacacacagtggaatggtggagttattgagaaatgttgacctcgagtat
ttgttagaccggtatccacctgagaaagaaataaattggggtgatgaattatctcttggg
gagcaacaaagattggggatggctagacttttctatcataagcctaaatttgcaattctt
gatgagtgcacaagtgctgtcacaactgatatggaggaacgtttttgtgctaaagttcga
gcgatgggaacgtcatgcattactatctcacatcgtccggctctagttgcatttcatgat
gtggtgttgtccttggatggtgaaggtggttggagtgttcagttcaaaagggaggattct
cctctccttaatgaaggtgggggaaatatgatgttgtctgagacgacccgacagagtgat
gcaatgacggttcaacgtgcatttgccacgactagaaaggattctacaatctcaaattcg
aaggcacaatcttacatcggtgaggtgatagcagtgtctccttccgaggatcataatgtt
acacatccatttgttccacagctccaaagggatcctcgagctttgccattgagagtagca
gccatgttcaaagtactgattcccacagttcttgataaacaaggagcacaactgcttgca
gttgcttttctcgtggtatcgagaacatggatttcagatcgtattgcttccttaaatgga
accactgtgaaatttgttttggagcaggataaggcagcctttattcgtctaattggcgtt
agtgttctgcagagtgctgcatcatccttcattgcaccttctttaaggcacttgacagcc
aggctggctcttgggtggaggattcgtttaactcaacatttactcaaaaattacttaaga
aataatgcattttataaggtagccatactgaaatgtgaaaaatcttctgagcacaccaat
attctagacatgcggttgagaactattctggagaatgtccgattgagttatcttttggaa
agggaagaaggtggttgggatgctaatctgaattgggaggacactctctcccttggagaa
cagcagagattaggcatggcacgcctattttttcacaagcctaaatttgccatccttgat
gaatgcaccaatgctacgagcgttgatgttgaagaacaactttatcggctcgcaaaagac
atgggtatcacagttgttacctcctcacaacgtcctgctctaattccattccatgctctg
gaattacggctcattgatggcgagggtaactgggagcttcgttcaataaaacaatga
DBGET
integrated database retrieval system
