Prunus mume (Japanese apricot): 103334050 Help Entry 103334050         CDS       T03196                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism pmum  Prunus mume (Japanese apricot) Pathway pmum03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pmum00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     103334050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pmum03400]     103334050 DNA repair and recombination proteins [BR:pmum03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      103334050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor AAA_29 Motif Other DBs NCBI-GeneID:  103334050 NCBI-ProteinID:  XP_008235198 LinkDB All DBs Position LG6:complement(1226706..1235824) Genome browser AA seq 1274 aa AA seqDB search MSRRRSNGHSPLINQQRQITSFFSKTTSSPSPISSKSKQTQNPNPSPGPSPSHTTPSPLQ SKPKPKKSHGQEVVGKRIRVYWPLDNIWYEGYVKLFSKDNGKHLVQYDDAEEELLDLGKE KIEWVQETVKTLKRLRRGPLSTSNEVVVDGHVVMEDEDEDKEGSNDVADDDSSDEDWGKS GDKDLVAEEEEELMELEDEEDDEVPTTSTNKGKRGLRSKRKVKGGGNLGSAKKTKCDKDV MEPTPNAESTKVANGMNTVVSGDASARFIVREAEKLHFLGEGRRDAKKRFPGDANYDPRT LYLPPDFLKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGAKELGLQYMKGE QPHCGFPEKNFSMNVEKLARKGYRVLVIEQTETPEQMELRRKEDGSKDKVVKREICAVVT KGTLTEGEMLSANPDASYLMAVTENSQNVANQNTERIFGVCVVDVATSRVILGQFGDDLE CSALSCLLSELRPVEIIKPVKLLGPETEKVLLRHTRSPLVNELVPLLEFWDAERTAQEIR RIYRCTVDQLVSGSPKTSNLHSNDSHLEEDDLGCLPDVLSELMRTGENGICALSALGGVL FYLKQAFLDETLLRFAKFELLPSSGFGDIVSKPYMVLDSAALENLEIFENSRNGDSSGTI YAQLNHCVTGFGKRLLKTWLARPLYHVELIKERQDAVASLQGVNLPYALEFRKAMSRLPD MERLLARVFSSSKACGRNANKVVLYEDAAKKQLQEFISALHGCELMVQTCCSLGVILEHV ESRQLHHLLTPGQGLPDVNSILKHFKDAFDWVQANSSGRIIPHEGVDIEYDSSCEKVKEI ESHLTKYLQEQRRLLGNKSITYVTVGKDSYLLEVPESLRGSIPRDYELCSSKKGIFRYWT PNIKKSLTGLSEAETGKESSLKSILHRLIGQFCEHHLKWRQLVSVTAELDVLISLAIASD YFEGPSCRPVIMSSSCTNEVPHFSAKSLGHPVLKSDSLGKGTFVSNDITIGGSGHASFIL LTGPNMGGKSTLLRQVCLAAILAQLGADVPAESFELSPVDRIFVRMGARDHIMVGQSTFL TELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHFVYKVQCRGMFSTHYHR LAVDYQSNPEVSLCHMACQVGNGDGGVEEVTFLYRLTPGACPKSYGVNIARLAGLPISVL QKAAAKSREFEATYGKHMKADSFFFQSPVDNMVSCILELISAVEKWTSHESTKSIDIDSL TEVWHRARILELQS NT seq 3825 nt NT seq  +upstreamnt  +downstreamnt atgtcgcgtcgtcggagcaacggccattctccattgatcaaccaacagcgccaaatcact tcattcttctccaaaaccacttcgtccccatcccccatttcttccaaatccaaacaaact caaaaccctaaccctagccccggtcccagccctagccacaccactccttcgcctctccag tccaagcccaagcccaagaaatcccatggccaagaggttgtcggcaagaggatcagggtt tactggccgttggataatatctggtacgaaggttatgtgaagttgttcagtaaggataat ggtaaacatttagttcagtacgatgatgctgaagaagagttgttggatttgggaaaggag aagatcgaatgggtccaggaaaccgtcaagaccttgaaacgtttgaggcgaggccctttg tcgacttccaacgaggtcgttgtggatgggcatgtggttatggaggatgaggatgaggat aaggaaggcagcaatgatgttgctgacgatgattccagcgacgaggactgggggaagagt ggggacaaagacctagttgctgaggaggaagaggagcttatggaattggaggatgaggaa gatgatgaagtgcccacaacaagcacgaacaaaggaaagcgaggcttgaggagtaaacga aaggtgaaaggtggagggaatttggggtctgctaagaagaccaagtgtgataaagatgtg atggagcctacccctaatgctgagagcacgaaggtggctaatggtatgaatactgttgta tctggtgatgcctcagcaaggtttatcgttcgtgaagctgagaagttgcacttcctgggg gaagggcgtagggatgccaaaaaaagatttcctggagatgcaaattatgatccaagaact ctttacttacctcctgatttcttaaagagtttatcaggtggccagagacaatggtgggag tttaagtcaaagcacatggacaaagttctctttttcaagatgggcaaattttatgaactt tttgaaatggatgcacacataggagcaaaagaacttggtctgcaatatatgaagggtgaa caaccccactgtggattcccagagaagaatttctcgatgaatgtggagaaactggctagg aaggggtatcgagttcttgttatagagcagacagaaacacctgaacagatggagcttcgt cgcaaagaggatggctctaaagataaggttgtgaaacgtgaaatatgtgcggtggttaca aaaggaactctaactgagggagagatgctgtcagcaaaccctgatgcttcttatctaatg gcagtgactgaaaactctcagaatgtggcaaaccaaaatacagagcggatttttggggtt tgtgtagttgatgttgctaccagccgcgtcattcttgggcagtttggagatgatttagag tgcagtgccttgtcttgtctcttgtccgagctgaggcccgtggaaattataaaacctgta aaactacttggtcctgaaacagagaaagtactgctaaggcatacaagaagtccactagtc aatgagttagtcccacttttagaattctgggatgctgagagaactgctcaggaaattaga cgtatctacaggtgcaccgttgatcaattggtttctggttctccaaagacatccaactta cattccaatgattctcatttggaagaagatgacttgggctgcctgccagatgtgttgtca gagcttatgagaacaggtgagaatggcatctgtgcactttcagctcttggaggcgttctt ttttatttaaagcaggcttttctggatgagacattactccgatttgcaaaattcgagtta cttccaagttctggttttggtgatattgtatcaaaaccatacatggttcttgactcagct gccctggagaaccttgagatttttgagaacagcagaaatggagactcttcagggacaata tatgcacaattgaaccactgtgttaccggatttgggaagcgattgcttaaaacatggctt gcaagacctctatatcatgtagagttgataaaggaacgccaggatgctgttgcaagtctt cagggagttaatcttccttatgcacttgaatttcgaaaagcaatgtctaggcttccagac atggagcggttgcttgcacgtgtcttctctagtagtaaagcttgcgggaggaatgctaat aaggttgttttatacgaggatgctgctaaaaaacagcttcaggagtttatttcagctttg cacggttgtgaactaatggttcagacatgttgttctcttggagtcatcttggagcatgtt gaatctagacaacttcatcatttgcttacaccgggtcaaggtcttcctgatgtcaactca attttaaaacattttaaggatgcctttgattgggtacaagccaatagttcaggtcgtata atacctcatgaaggagttgatattgaatatgactcttcctgtgaaaaagtaaaggagata gaatctcatttaacaaaatacctccaagaacagagaagattacttggaaataaatcgatc acttatgtcactgttggaaaagattcttacctgttggaagtgccagaaagtctgcgtggg agtattcctcgagattatgagttatgttcatcaaaaaagggtatcttcagatactggaca ccaaatattaagaaatcattgacagggctatcggaagctgaaactggtaaagagtcctca ctaaaaagcattctgcataggttaattggacaattctgcgagcatcatcttaaatggaga caattggtctctgtgactgcagaattggatgttttaatcagtctagcaatagcaagtgat tattttgaaggaccgtcttgtcggccagttatcatgagttcatcatgtactaatgaggta ccccacttctctgcaaaaagtttgggacatccggttcttaaaagtgattctttagggaaa ggtacatttgtctccaatgacattactattggaggttctggccatgcgagctttatcctt ctcactggtccaaacatgggtggaaagtcaactcttcttcgccaagtttgcttggctgcg attttagcccagttaggagcagatgtgcctgcagagagctttgagctatctcctgttgac cgaatctttgttcgtatgggtgccagagatcatatcatggtaggccaaagtacatttctg acagagctttcagaaaccgcaacaatgctgtcgtctgctactcgtaattcattggtggca ctggatgaacttggacgtggaacatcgacttcagatggacaagccattgcggaatctgtt cttgaacattttgtctacaaggtccagtgtcgaggaatgttttctacccattatcatcga ctagctgtagattatcagagcaatcctgaggtttcactctgccatatggcatgccaagtt ggaaatggagacggaggtgtggaagaagttacatttctttacaggctgactcctggtgca tgccctaaaagctatggtgtcaacattgcacggttagctggacttcctatttctgtcctt caaaaagctgctgctaagtctagggaattcgaggctacatatggtaaacacatgaaggca gatagctttttctttcaaagtccagttgacaacatggtaagttgcatcctagagttgatt agtgctgtggaaaaatggactagtcatgagtctaccaagagcattgacattgactcccta actgaagtttggcatagagcaagaatacttgagctgcaaagttga

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