Prunus mume (Japanese apricot): 103334989
Help
Entry
103334989 CDS
T03196
Name
(RefSeq) 4-coumarate--CoA ligase-like 6
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00130
Ubiquinone and other terpenoid-quinone biosynthesis
pmum00940
Phenylpropanoid biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Module
pmum_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pmum_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
103334989
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
103334989
Enzymes [BR:
pmum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
103334989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
103334989
NCBI-ProteinID:
XP_008236197
LinkDB
All DBs
Position
LG6:6349342..6351526
Genome browser
AA seq
574 aa
AA seq
DB search
MATPSNTNFNSHISGKQSINQKALAAEQFPWWFSPETGIYQSKHLSIDLPSDPFLDIVSF
IFSHQHDGVSSALIGSSCGSAISYSQLYSSVKSMASGLQQMGISQGDVVLLLLPNSIYYP
IAFLGVLYLGAIVTTMNPLSNLAEIKKQIADTKACHAFTGPENADKLQALGIHVILVPAN
AISGLKGSSKDIFSVFYKLIYSRCYLALRPVIKQQDTAAIMYSSGTTGVSKGVMITHRNF
IATVAHFVRFEASQYEASSLDNVYLAVLPLFHIYGLSLFVMGLLSLGSRIVVMKRFDVNE
VIRAIDRYKVTHFPVVPPVLTALTKRAKDGLAPHSLKSLKQISCGAALLSMKTIEDFVQT
FPHIDLIQGYGMTETTAVGTRGFNTEKLRKPSSIGVLAPNMQAKVVDWNTGSPMPPTSTG
ELWLHGPGIMKGYLNNAKATLSTIDEEGWLHTGDIVFFDEDGYLHLQDRLKDAIKYKGFQ
IAPADLEGVLINHPEILDVAVAGAMDEESGEVPVAFVVRKHRSELNHDAVMDFVAAQVAP
YKKVRKVVFVDSIPKSPAGKILRRELRKFLNSRL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccctcaaacaccaactttaactcccatatctcaggaaaacagagcattaac
caaaaagctttagctgcagaacagtttccttggtggttttcaccagaaacgggaatttac
caaagcaaacacctttccattgacctcccatcagacccttttcttgatattgtctccttc
attttctcacaccagcatgatggggtttcctcagctctcattggttcctcttgtgggtct
gcaatatcttactcacagctctactcttctgtcaagtccatggcctctggcctccagcaa
atgggaatctcacaaggtgatgttgttttgcttcttttgccaaattccatttactatccc
attgctttcttgggtgttttgtaccttggtgctattgtcacaaccatgaatcccctcagc
aatctagcagaaatcaagaaacagattgctgataccaaagcatgtcatgcttttactgga
cctgagaatgctgataaattacaagcattgggcattcatgtaattctggtacccgcaaat
gcaatttcggggttgaagggttcttcaaaggacattttttcagttttttataagcttatt
tatagtaggtgttatttggctctaagaccagtgattaagcagcaagacactgctgcaata
atgtattcgtccgggactactggtgtaagcaaaggtgttatgataacacataggaatttc
attgctacagttgcccattttgtgcgttttgaggcttcacagtatgaggcttcaagcttg
gataatgtgtatttagctgttctgccattgtttcatatctacgggttgtcgcttttcgtg
atggggttgttgtctttaggatctagaattgttgtgatgaagagatttgatgtcaatgag
gtgatcagggcaattgataggtataaagttacacacttcccagttgttccaccagtattg
acagcattgacaaaaagagccaaggatggcttggcccctcatagcctcaagagtttaaag
cagatttcttgtggtgcagctctgttgagcatgaaaaccatagaggactttgttcaaacc
tttcctcacatcgatctcattcagggctacggcatgactgagaccaccgcggtaggaact
cgtggtttcaacaccgaaaagcttaggaaaccctcttcaataggggttttagctccaaac
atgcaagctaaagtggtggactggaacactggatcccctatgcctccaacaagtaccggt
gagctatggctacacggaccggggattatgaagggctacttgaacaatgccaaggcaaca
ttgtcaacaattgatgaagagggctggctacacaccggagacattgtgttttttgatgaa
gatggatacttacatctacaagaccgcttaaaagacgcgatcaaatacaagggctttcag
attgctcctgcagatttagaaggtgtgctgatcaaccatcctgagatacttgacgttgct
gtggcaggtgccatggatgaagaaagtggagaggttcctgtggcttttgtggtgaggaag
cacagaagtgaactaaaccatgatgctgtcatggattttgtggctgcacaagttgctcca
tacaagaaggtcaggaaggtggtgtttgtagattcaattccaaagtctccagctgggaag
atcttaagaagggagcttaggaagtttttgaattctagactctag
DBGET
integrated database retrieval system