Prunus mume (Japanese apricot): 103338803
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Entry
103338803 CDS
T03196
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103338803
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103338803
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103338803
03036 Chromosome and associated proteins [BR:
pmum03036
]
103338803
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103338803
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103338803
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103338803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
SCD
CLASP_N
RTP1_C1
Cnd1
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
103338803
NCBI-ProteinID:
XP_008240282
LinkDB
All DBs
Position
LG7:16512450..16519490
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSDNNDDD
DEVLLAMAEELGVFIPYVGGVEYANILLPPLETLCTVEETCVRDKAVDSLCRIGVQMREK
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLRTELRTTYSQLCQDDMPMVR
RSAATNLGKFAATVEATHLKADILSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQQILPFVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGSLCMQWLNDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAISLLAPVLGSEITCSKLLPVVINASKDRVPNIKFNVAKVLQS
VIPIVDQSVVEKMIRPCLVELSEDPDVDVRSFASQAFQSIEQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatgaacctttatacccaattgcggttttaatcgacgagctcaagaat
gaagacatccagctccggttgaactcaatccgcaggctctccaccattgctcgtgcactt
ggggaagagaggaccaggaaggaactgattcctttcctcagcgataacaatgatgatgat
gatgaagtgcttctggcaatggcagaagagttgggggtgtttatcccatatgtaggtggt
gtagagtatgccaacattctgctcccacctttggaaacgctctgcactgttgaggaaaca
tgtgtgagggacaaagcggtggattcattgtgtagaattggggtgcagatgagggagaag
gacttggtggagtatttcattcctttggttaagagacttgctgctggcgaatggtttaca
gcccgagtttcatcctgtggtttgtttcatattgcttatcctagtgccccagagacttta
aggactgaactaagaacaacatacagtcaactgtgccaagatgacatgcccatggttaga
agatctgctgctactaacctaggaaaatttgctgcgactgtagaagccacacacctcaaa
gctgacatcttgtcaatatttgaggatttgacgcaggatgatcaggattctgttcggtta
ttggcagtagagggttgtgcagctcttgggaagttgttggaaccacaagattgtgtgacc
catattcttcctgtcattgttaatttttcacaggataagtcttggcgtgttcgttatatg
gttgcaaatcaattatatgagctgtgtgaagctgttggtccagaagctacaaggtctgac
ctggtgcctgcatatgttcggctgcttcgtgataacgaggctgaagtgcgaatagctgct
gcaggaaaagtaactaagttttgcagaattttgaatccagagcttgcaattcagcagatc
cttccgtttgtgaaggaattgtcaacagattcatcccaacatgttcgttctgcattggct
tcggtaataatggggatggcaccagttttaggaaaggatgcaaccatagagcaactactg
cctattttcctttctcttctaaaggatgaattccctgatgtccggctgaatattattagc
aagcttgatcaagtcaaccaggtaattgggattgatctgctgtcccaatctctattgcca
gcaattgttgaacttgcagaggatagacattggagggttcggctcgcaataatagaatat
atccctttattggcaagccagttgggtgtagggttttttgatgataagcttgggtctctt
tgcatgcagtggttaaatgataaggtttactcaatacgtgatgcagctgctaataatgtg
aagcgccttgcagaagaatttggccctgattgggcaatgcagcatatagtcccacaggtt
ttggatatgattaacaaccctcactatttgtatcgaatgaccattctacatgcaatttcc
ctactcgctcctgttttgggatcagaaatcacttgttcgaaacttctaccggttgtcatc
aatgcatcaaaagatagggtaccaaacatcaagttcaatgtggctaaagtgttgcagtca
gttattccgatagttgatcagtctgtggtggagaagatgattcgcccttgtttggttgag
cttagcgaggatcccgacgttgatgtaaggtcttttgctagccaagctttccagtcaatt
gaacaggtcatgatgtctagctag
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