Protobothrops mucrosquamatus (Taiwan habu): 107294405
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Entry
107294405 CDS
T05763
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmur04040
]
107294405 (SCN1A)
Ion channels [BR:
pmur04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107294405 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
Lustrin_cystein
K_channel_TID
MIT_C
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
107294405
NCBI-ProteinID:
XP_015679123
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MEQPVLVPPGPDSFHYFTRESLAAIEQRIVAEKAKQSKQDHKDNDENGPKPSRDLEAGKS
LPFIYGDIPSGMVATPLEDLDPFYVNTKTFIVLNRGKAIFRFSATPALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSKPPDWTKNVEYTFTGIYTFESLIKIIARGFCI
DGFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLFWNPPNSTDSNDTDLFNTTFGE
NGTLNNTPFDWDAYIKDENNFYFLEGQNDALLCGNSTDAGQCPEGYFCIKAGRNPNYDYT
SFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVA
MAYEEQNQATMEEAEQKEAEFQQMLEQLKKHQEAVQAAAIAAATASAESKDPSTGGGTGQ
HSESSSETSKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHRSESEDSIRRKGCRFSI
EGNRLTLERKHSSPHQSLLSMRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFADDEHSTF
EDNDSRRDSLFVPRRHGERRNSNLSQASRSSRMLAVFPVNGKMHSTVDCNGVVSLVGGPS
VPTSPVGQLLPEVIIDKPATDDNATTTETEIKKRRSSSFHISMDFLEDPTIRERAMSVAS
ILTNTMEELEESRQKCPPCWYKFANIFLIWDCCPGWLKVKHFVNIIVMDPFVDLAITICI
VLNTLFMAMEHYPMTDRFSEVLNVGNLVFTGIFTGEMFLKLVAKDPYYYFQEGWNIFDGF
IVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLA
IIVFIFAVVGMQLFGKSYKECVCKIAKDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWD
CMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAMGR
IDKGVDFMKRKTHEFIQKSFVKKQKALDEIKPLEELHNKNICISNHTVEIGKGLDYFRDI
NGTTTSGIGTGSSVERYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDL
EESKEKLNSSSSSSEGSTVDIGQPAEEQAVEPEEALEPEACFTEGCVQRFKCCQVSVEDG
KGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDVYIEQRKTIKTILEYADKVF
TYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLR
ALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNT
TTGNMFEIDEVANISECENLIKANETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMY
AAVDSRKVREQPKYEDNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPGNKYQGMVFDFVTKQVFDITIMILICLNMITMM
VETDDQSKQTEDILYRINFIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGM
FLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFMITTSAGWDGLLAPILNSGPP
DCDPKKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVATEESAEP
LSEDDFEMFYEVWEKFDPDATQFMEFEKLSEFAAALEPPLHLPKPNKVQLIAMDLPMVNG
DRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMQSNPSKASYEPITTTLKRKQEELSA
VIIQRAYRRYRLTQTIKKASFLYNKNKMEGGASQRIKDEFLVDKMNENTYTDMTMSTAIC
PPSYDCVTMPVEEKHEKEGKDVQKKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccagtgcttgtaccaccaggtccggacagctttcactacttcactagagag
tctcttgcagctatcgaacaacgcattgttgcagaaaaagccaagcagtccaaacaagac
cataaagacaatgacgaaaatgggccaaaaccaagtagagacttggaggctggcaaatca
ctgccatttatttatggtgacatcccttctggaatggtcgctactcccttggaagacctg
gatccattttatgttaatacaaaaacttttatagtattgaatagagggaaggcaattttc
cgattcagtgccacccctgccctatacattttaactcctttcaaccctcttagaaaaata
gctattaagattttggtacattcattattcagcatgctcattatgtgcactattttgacc
aactgcgtatttatgaccctaagtaagccccctgattggacaaagaatgtagaatataca
ttcacaggaatatatacctttgaatcccttataaaaataattgcaaggggcttttgtata
gatggtttcactttcctccgagatccttggaactggcttgatttcactgtcattacattt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcagagtt
ctccgggcattgaaaacaatatcagtcatcccaggtctgaagacaattgtgggagctctc
attcagtctgtgaagaaactatccgatgtgatgattctgacagtgttttgtctgagtgtc
tttgctctcataggactccaactgttcatgggcaacttgaggcataaatgtttgttttgg
aatccaccaaattctacagattctaatgatactgatctatttaatactacatttggagaa
aacggtacattgaataatactccatttgactgggatgcatacataaaagatgaaaataat
ttttattttttggaaggacaaaatgatgctttgctttgtggtaacagcactgatgcaggt
caatgtccagaaggctatttttgcataaaagctggaaggaatccaaactacgattataca
agttttgatacattcagttgggccttcttgtctctctttcgactgatgactcaggatttc
tgggaaaatctttatcagctgactctacgtgctgctggcaaaacatacatgatctttttt
gtcctggtgattttcttgggttctttctacctgatcaacttgatcctggctgttgttgcc
atggcctatgaagagcagaatcaagccaccatggaagaagctgagcagaaagaggcagag
ttccagcagatgctggaacagctgaaaaaacatcaagaagcagtccaggcagcggcgatt
gctgcagcaactgcatctgcagaatctaaagatcccagcacaggaggtggaacggggcaa
cattcagaaagttcatctgaaacatcaaaattgagttccaagagtgccaaagagagaaga
aatagaaggaagaaaagaaaacaaaaagaacaatctggtggagaggaaaaagatgaagat
gagtttcacagatctgaatctgaagatagtatcaggagaaaaggttgccgattctccatt
gaagggaataggttaacattagaacgaaagcattcttctccccatcagtctttgctgagc
atgcgtggctcgctgttttccccacggcgcaacagcagaacaagccttttcagcttcaga
ggtagagcaaaggatataggatcagagaatgactttgctgatgatgaacacagcactttt
gaagataatgatagcagaagagattctctttttgtgccgcgcagacatggtgaacggcgc
aacagtaaccttagtcaggccagtaggtcatccaggatgctggcagtgtttccagtgaat
gggaagatgcacagcactgtggattgcaatggggtggtttccttggttggtggaccatct
gttcctacatcgcctgttggacagcttctgccagaggtgataatagataaaccagctact
gatgacaatgccacaacaacagaaacagaaattaaaaaaagaagatcaagttctttccat
atttctatggactttttggaagaccccacaataagagaaagagccatgagtgtagctagt
atactcacaaacaccatggaagaacttgaagagtcacggcagaagtgtccaccttgctgg
tacaaatttgctaacattttcttaatctgggactgctgcccgggttggctgaaagtaaag
cattttgttaacatcatagtgatggatccatttgttgaccttgctattacaatttgcatt
gttttaaatacattgttcatggcaatggaacattacccgatgacagacagattttcggaa
gtccttaatgttggaaacttggttttcacaggaatcttcacaggagaaatgtttcttaaa
ctagtagccaaggatccatattattatttccaagaaggctggaatatttttgatggtttt
attgtcacccttagtttggttgaacttggcctagcaaatgtggaaggactctcagttctc
cgatcgttcagactgttgcgagttttcaaattggctaaatcttggccaaccctaaatatg
ctgatcaaaattattggcaactctgtgggtgctttgggaaatctgactttggtcctggcc
atcattgtcttcatttttgctgtggttggtatgcagctctttggtaaaagctacaaggaa
tgtgtgtgcaagattgcaaaagattgtgaactccctcgttggcacatgaatgactttttc
cactctttcttgatcgttttccgagttctttgtggagaatggatagaaaccatgtgggac
tgtatggaggttgcaggtcaagccatgtgccttacagtcttcatgatggttatggtgatt
ggaaatttagtggtgctgaatctctttttggccttgctcttgagctcatttagtgcagat
aaccttgctgctacagatgacgataatgaaatgaacaatctccagattgcaatggggagg
attgacaaaggagtagattttatgaaaagaaaaacccacgaattcatccagaaatccttt
gttaaaaagcaaaaagctctagatgaaatcaaacctcttgaggagctccacaataaaaac
atctgcatctctaaccacaccgtggaaattggcaaaggtcttgattattttagagatata
aatggaaccaccaccagtggcataggcaccggcagcagcgtggaaagatatgtggtagat
gaaagtgattacatgtcgttcattaacaatccaagtctgactgtgactgtacccattgct
gttggagaatctgattttgaaaatttaaataccgaggaattcagcagtgagtctgatttg
gaagaaagcaaagaaaaactgaattcttctagctcatcatcagaaggaagcacagttgat
attgggcaacctgctgaagaacaagcggtagaacctgaggaggctcttgaacctgaagct
tgttttacagaaggttgtgtacaaagattcaagtgttgtcaagttagtgtagaagatgga
aaaggaaagcaatggtggaatctcagaaaaacctgtttccgaatagttgaacacaactgg
tttgaaaccttcattgtttttatgattctccttagcagtggtgctttggcctttgaagac
gtatacatagaacagaggaaaaccatcaagaccatactggaatatgctgacaaagtcttc
acttacatcttcattcttgaaatgcttctgaaatgggtagcatatggatatcaaacatac
tttactaatgcctggtgctggctggatttcttgattgttgatgtatccttggttagttta
acagcaaatgcgctgggttattcagaacttggtgccattaaatcccttaggacactgaga
gcattgagacctttaagagccttatcaagatttgaagggatgagggtggttgtgaatgcc
cttcttggagcaattccatccatcatgaacgtgcttcttgtttgtcttatattctggctg
attttcagcatcatgggagtaaacctgtttgctggcaaattctaccactgtgttaatacc
acaactggcaacatgtttgaaattgatgaagttgccaatatatctgagtgtgagaatctc
ataaaggcaaatgaaactgccagatggaaaaatgtgaaagtcaactttgataacgtagga
tttgggtatctttctttattgcaagtagccacttttaaaggatggatggatattatgtat
gcagcagttgattcaagaaaagtgcgtgaacagcctaagtatgaagataacctttatatg
tatatttactttgttatctttatcatctttggatcattttttaccctgaatttatttatt
ggtgtcatcatagataacttcaatcaacaaaaaaagaagtttggaggccaagacatcttt
atgacagaagaacagaaaaagtactacaatgcaatgaaaaaattggggtcaaaaaaacct
caaaaacccatacctaggccagggaacaaatatcaaggcatggtgtttgattttgtgacc
aaacaagtatttgacatcactattatgattcttatctgccttaacatgatcaccatgatg
gtagaaacagatgatcaaagtaaacaaacagaagatattctctaccgcattaattttata
tttattgtccttttcactggagaatgtgtcctcaaactaatttccctacgctattattat
ttcacaattggatggaacatttttgacttcgtggttgtcatcctttccattgtaggtatg
tttttggcagagatcattgagaaatattttgtgtcccccaccttgttccgagtaattcga
cttgcccggataggtcgaatcctgcgtctaatcaagggggcaaagggaatccgcactctg
ctttttgccttgatgatgtctctccctgccttgtttaacattggtctcctccttttcctg
gtcatgttcatctatgccatatttggaatgtccaactttgcctacgtgaagagagaagtt
ggcattgatgacatgttcaactttgaaacttttggcaacagcatgatctgcctctttatg
atcaccacctctgctggctgggatggtttgctagcacccatcctgaacagcgggcctcca
gactgcgaccctaaaaaagaccacccaggaagttccgtcaaaggagactgtggcaatcct
tcggttgggattttcttctttgtcagttacattatcatctcatttttagtcgtagtgaac
atgtacattgctgtcattttagagaactttggtgtggcaactgaagaaagtgctgagcct
ttgagtgaggatgattttgagatgttctatgaggtctgggaaaagtttgacccagatgct
acacagtttatggagtttgaaaaactttcagagtttgcagctgctctggagcctcctctt
cacttacctaaaccaaacaaggttcaacttattgcaatggacctgcccatggtgaatggt
gacagaattcactgcctcgatatattgtttgctttcaccaaacgtgttctgggggaaagc
ggagagatggacgctctccgcattcagatggaagaccgcttcatgcagtcgaatccatcc
aaagcctcctatgagcccatcacaactaccttaaaaaggaaacaagaggagctatcggct
gtcatcatccaacgagcttacaggcgttatcgtctgacacaaacaataaagaaagcttca
tttttatataataaaaataaaatggaaggaggggctagccaacgtattaaagacgaattc
ctcgtcgacaaaatgaatgaaaacacttacacagatatgaccatgtcaacagctatctgt
ccaccatcctatgattgtgtaaccatgccagttgaagaaaaacatgaaaaagaaggcaaa
gatgtacaaaagaaaaaataa
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integrated database retrieval system
