Protobothrops mucrosquamatus (Taiwan habu): 107295439
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Entry
107295439 CDS
T05763
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pmur
Protobothrops mucrosquamatus (Taiwan habu)
Pathway
pmur03020
RNA polymerase
pmur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107295439 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
107295439 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmur03021
]
107295439 (POLR2A)
03400 DNA repair and recombination proteins [BR:
pmur03400
]
107295439 (POLR2A)
Enzymes [BR:
pmur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107295439 (POLR2A)
Transcription machinery [BR:
pmur03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107295439 (POLR2A)
DNA repair and recombination proteins [BR:
pmur03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107295439 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107295439
NCBI-ProteinID:
XP_015680237
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MHGGAPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEAGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKVLRCVCFFCSKLLVDS
NNPKIKDILTKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKGH
GGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFILGMDPK
YARPEWMICTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVAPFNIDRLQELVSRGNSQYPGAKYIIR
HNGDRIDLRFHPKSSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CVRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYANERALRRTLQEEMVKDILSNAHIQNELEREFEKMKE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINTRLPSDLHPIKVVEGVKELSKKLV
IVNGDDPLSKQAQENATLLFNIHLRSTLCSRRMIEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPD
FDVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKFGMEIPTNITGLGVGGPTGM
FFGSAPSPMGGVSPATTPWNQGATPAYGAWSPSV
NT seq
4603 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcgcgccctccggggacagcgcgtgcccgctgcgcaccatcaagcgcgtg
cagttcggcatcctcagcccggatgagatgaaacggatgtcggtgaccgaagcgggcatc
aagtacccggagaccaccgaaggcggtcgccccaaactgggggggctgatggaccctcgc
caaggggtcatcgagaggaccgggcggtgccagacctgcgcaggcaacatgacggagtgt
cccggccattttggccacatcgagctggccaagcccgtcttccacgtcgggtttttggga
aaaactatgaaagtccttcgttgcgtttgcttcttctgctccaagctgctggtcgactcg
aacaatccgaagatcaaggatatcttgaccaaatccaaggggcagccgaagaagcgcctg
acgcacgtctacgacctctgcaaaggcaagaacatctgcgaggggggagaagagatggac
aacaaatttggggtggagcagcccgaaggcgacgaggacctcaccaaagaaaagggccac
gggggctgcggacgctaccagccccggatccgccgctcaggcctggagctgtacgccgag
tggaagcacgtgaacgaggattcgcaggagaagaagatcctgctgagcccggagcgggtc
cacgagatcttcaagcgcatctcggacgaggaatgcttcatcctgggcatggaccccaag
tacgcccggccggagtggatgatctgcaccgtgctgcccgtccctccgctctccgtccga
ccggctgtcgtcatgcagggctcggccaggaatcaggatgacttgactcataagctggcc
gacattgtgaaaatcaacaaccagttgcggcggaacgagcagaacggggcggccgctcac
gtcatcgcggaagacgtcaagctcctccagttccacgtggccaccatggtggacaatgaa
ctgcccgggctgcccagggcgatgcaaaagtccggccggcctctgaagtccttgaagcag
cgtctgaagggcaaggaaggccgggtccgagggaacctgatgggcaaacgggtggacttc
tccgcccggacggtcatcacgccggaccccaacctctccatcgaccaggtgggcgtgccg
cgctccatcgccgccaacatgacctttgcggagatcgtggcgccattcaacatcgacaga
ctgcaggagctggtgagccgagggaacagtcagtatcccggtgccaagtacatcatccgg
cacaacggggaccggattgatctccgcttccacccaaagtccagcgacctccacttgcag
atcgggtacaaggtggagcggcacatgtgcgacggggacatcgtcattttcaaccggcag
cccacgttgcacaaaatgtccatgatggggcaccgagtgcgtatcctgccctggtcgacc
ttccgactcaatctcagcgtcaccaccccgtacaacgccgactttgacggcgacgagatg
aacctccacctcccgcagtcgctggagacccgggcggagatccaggagctggccatggtc
ccccggatgatcgtcaccccccagtccaaccggcccgtcatgggcatcgtgcaggacacg
ctgacggcggtccgcaagttcaccaagagggacgtcttcctggagaggggggaagtgatg
aatttgctgatgttcctgtccacctgggacggcaaagtgccccaaccggccatcctgaag
cctcgcccgctctggaccggcaagcagatcttctccttgatcatcccgggacatatcaac
tgtgtccggactcacagcacccatccggacgacgaagacagcggcccgtacaagcacatc
tctcccggagacaccaaggtcatcgtggagaacggcgagctgatcatgggcatcttgtgc
aagaaatccttgggcacctcggccggctccctggtccacatctcctacctggagatgggc
cacgacgtcacccgcctcttctacagcaacatccagacggtcatcaacaactggctgctg
atcgaaggacacaccattggcattggtgactccatcgctgacgccaagacctaccaggac
atccagaacaccatcaagaaagccaagcaggatgtgattgaggtcatcgagaaggcccac
aacaacgagctggagcccaccccgggcaacaccctccgccagacctttgagaaccaggtc
aaccgcatcctgaacgacgcccgcgacaagacgggctcctctgcccagaagtccctctcc
gagtacaacaacttcaagtccatggtggtctcgggggccaaaggctccaaaatcaacatc
tcccaggtcatcgccgtggtgggtcagcagaacgtggaagggaaacgcatccccttcggc
ttcaagcaccggacgctgccccacttcatcaaggacgactacgggccggagagcaggggc
ttcgtggagaactcctacctggccggcctgacccccaccgagttcttcttccacgccatg
gggggccgagaagggctgatcgacacggccgtcaagacggccgagacgggttacatccag
cgtcggctgatcaagtccatggagtcggtcatggtgaagtacgacgccaccgtccgcaac
tccatcaaccaggtggtgcagctgcgttacggcgaggatgggctggccggagagagcgtc
gagttccagaatctggccacgctcaagccttccaacaaggcctttgagaagaagttcaag
ttcgattacgccaacgagcgggctctgcggcgcaccctgcaggaggagatggtgaaggac
atcctgagcaacgcccacatccagaacgagctggagagggagtttgagaagatgaaggag
gaccgggaggtgctgagggtcatcttccccacaggggacagcaaggtggtcctcccctgc
aacctgctgcgcatgatctggaacgcccagaaaattttccacatcaacactcgcctcccc
tccgacttgcatcccatcaaggtggtggaaggcgtgaaggagctgagcaagaagctggtg
attgtgaacggcgacgacccgctgagcaagcaggcccaggagaacgccaccctgctcttc
aacatccacttgcgttccacgctctgcagccgtcgcatgattgaggaattccggctgagc
ggggaagcctttgactggctgctgggagaaatcgaatccaagttcaaccaggccatcgcc
caccctggtgagatggtgggggccttggccgcccagtcccttggagaacctgctacccag
atgaccctcaacaccttccactacgctggggtctcggccaaaaacgtgacccttggggtg
cctcggctgaaggaactgatcaacatttccaaaaagcccaagaccccttccctgacggtc
ttcctcctgggacagtccgcccgtgacgctgagagggccaaggatatcctttgccgcttg
gagcacaccacccttcgcaaggtgacggccaacacggccatctactacgaccccaaccct
cagaacaccgtggtggctgaggaccaggagtgggtgaacgtctactacgagatgcccgac
tttgacgtcacccgcatctccccttggctgctgagggtggagctggaccgcaagcacatg
acagaccgcaagctcaccatggagcagattgccgagaagatcaatgctggctttggagat
gacctcaactgcatcttcaacgatgacaatgctgagaagttggtgctacgcattcgtatc
atgaacagcgacgagaacaagatgcaagaggaggaagaggtggtggataagatggacgac
gacgttttcctgcgctgcatcgaatccaacatgctgacggacatgaccctgcaaggcatt
gagcagatcagcaaggtgtacatgcacctgccccagaccgacaacaagaagaaaatcata
atcactgaagatggcgagttcaaagccctccaggaatggatcctggaaaccgacggcgtg
agcctcatgcgtgtgctgagcgagaaagacgtggaccccgtgcgcaccacctccaacgat
atcgtggagattttcacggtgctgggaatcgaggcggtgaggaaggccctggaacgggag
ctgtaccacgtcatctcctttgacggctcctacgtcaactatcgccacttggccctgctc
tgcgacaccatgacctgtcgcgggcacttgatggccatcacgcggcacggcgtcaaccgc
caggacacggggccgctcatgaagtgctccttcgaagagacggtcgatgtcctgatggag
gcggccgcccatggcgagagcgaccccatgaagggggtctcggaaaacatcatgctgggc
cagctggcgccggccggcaccggttgcttcgacctgcttttggacgcggaaaaatgcaaa
ttcggcatggagatccccaccaacatcaccgggctgggcgtcggggggcctaccggcatg
ttcttcggctctgcgcccagccccatgggcggggtgtcccctgccaccaccccgtggaac
caaggtgccacgccagcctacggcgcctggtcgcccagcgtgg
DBGET
integrated database retrieval system
