Pasteurella multocida subsp. multocida HN06: PMCN06_2010
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Entry
PMCN06_2010 CDS
T01776
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv00540
Lipopolysaccharide biosynthesis
pmv01100
Metabolic pathways
pmv01250
Biosynthesis of nucleotide sugars
Module
pmv_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PMCN06_2010 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmv01005
]
PMCN06_2010 (rfaD)
Enzymes [BR:
pmv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PMCN06_2010 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pmv01005
]
Core region
PMCN06_2010 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AFF25236
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Position
complement(2129801..2130733)
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNELGRTDILVVDNLKDGTKFANLVDLDIADYCDKEDFIASI
IAGDDLGDIEVIFHEGACSATTEWDGKYIMHNNYEYSKELLHYCLDREIPFFYASSAATY
GDKTEFREEREFEAPLNVYGYSKFLFDQYVRAILPEANSPVCGFRYFNVYGPRENHKGAM
ASVAFHLNNQILKGEKPKLFAGSEHFRRDFVYVGDVAAVNIWCWQNNISGIYNLGTGNAE
SFLEVAKAVVKFHGKTEADIEIIPFPEHLKSRYQEYTQANLDKLRATGYDKPFKTVAQGV
AEYMAWLNRK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggtgctggctttattggaagtaacattgtaaaagccttaaac
gaattagggcgtacggatattttagtggtagataatttaaaagatggtacaaagttcgct
aatttagtggatttggatattgcagattattgtgacaaagaagattttattgcctcgatc
atcgctggtgatgatttaggggatattgaagtcattttccacgaaggcgcctgttctgct
actaccgaatgggacggcaagtacatcatgcacaataactatgaatattccaaagagtta
ttgcattattgtttagatcgtgaaattccgttcttttatgcttcatctgcagcaacctat
ggtgataaaactgaattccgtgaagaacgcgaatttgaagcaccattaaatgtttacggc
tattccaaattcttatttgatcaatatgtccgtgccattttaccagaagctaactcaccg
gtttgtggcttccgttatttcaacgtgtacggtccacgtgagaatcacaaaggcgcgatg
gcaagtgtggcattccacttaaataaccaaattttaaaaggggaaaagccaaagttattt
gcaggcagtgaacatttccgccgtgactttgtgtatgtgggcgatgtggctgctgtgaat
atttggtgttggcaaaacaacatttctggcatctataacttgggaacaggcaatgcggaa
tctttccttgaagtcgcaaaagccgtcgtgaagttccatggtaaaacggaagcagatatt
gaaatcattccattcccagaacatttaaaaagccgttaccaagaatacactcaagccaat
ttagataaattacgcgccactggctatgacaaaccgtttaaaacggtcgcacagggtgta
gcagaatatatggcatggttaaaccgtaaataa
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