KEGG   Persephonella marina: PERMA_1907
Entry
PERMA_1907        CDS       T00870                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pmx  Persephonella marina
Pathway
pmx00740  Riboflavin metabolism
pmx01100  Metabolic pathways
pmx01110  Biosynthesis of secondary metabolites
pmx01240  Biosynthesis of cofactors
pmx02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PERMA_1907 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PERMA_1907 (ribD)
Enzymes [BR:pmx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PERMA_1907 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PERMA_1907 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ACO03769
UniProt: C0QSM3
LinkDB
Position
complement(1821009..1822106)
AA seq 365 aa
MERVNDEIFMKEALRLAELRKGLTHPNPTVGAVIVKDGKIIGKGFHKKAGMPHAEREAIN
DAIKKGFNLEGSTMYVTLEPCCHYGRTPPCTEAIIDRRIKRVVIATVDPNPQVSGKGVEI
LKKHGIETVVGVLQDEARKLNEDFFVYIKEKRPFIHLKIAQSLDGKIATGTGSSKWITSE
ESRRYVHKLRRESTAIMVGTNTVLKDNPNLTVRYTETERQPLRVVLDKDLKIPEDYNVFN
NEAKTVLFTSDIADRNKIKRLEDKGVQIVRLPLKNRRFDLNDILKNLYSLDVVHLFIEGG
RDLITQFLKEKLFDRISVFIAPKIIGEDGISSFGKLGIDTVDKSINLHLEDIKRFGDDIL
LQLRP
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggaaagggtaaatgatgaaatatttatgaaagaggctttgaggttagctgagctcaga
aaaggtctcacacacccaaaccctactgtgggagctgttatcgttaaagatggaaagata
attggaaaagggtttcataaaaaagcaggcatgccccacgcggaaagggaggctataaat
gatgccataaaaaaaggttttaacctggaaggctcaactatgtacgtaacacttgagccc
tgctgccattacggaagaacaccaccatgtacagaggcaataatagacaggagaataaaa
agggttgttatagccacagttgatcctaatcctcaggtctcaggtaaaggtgttgaaatc
ctaaaaaaacacgggatagaaacagttgtaggtgttcttcaggatgaggcaagaaagtta
aatgaagactttttcgtttatattaaggaaaaaagaccttttatacacctgaaaatagct
caatccttggatggtaagatagcaacaggaacaggatcatcaaaatggataacatctgaa
gaatcaaggagatacgtacataaacttcgtagggaatcaacagcgataatggtcggaaca
aacacagttcttaaagataacccaaatttaaccgtaagatacactgaaacggagagacag
cctttaagagtggttctggataaagatctaaaaattccagaagattataatgtgtttaat
aatgaagcgaaaactgttctgttcacatcagacatcgctgataggaataagataaaaagg
cttgaagataaaggtgtccagatagttagactcccattaaaaaatagaaggtttgatctg
aacgatatattaaaaaatctttactctctggatgttgttcatctatttattgaaggaggg
agagatctgataacgcagtttttaaaggaaaagctgtttgacagaatttccgtttttata
gcacctaagattataggagaggatggtatatcctcttttggaaaacttggaattgatact
gttgataaaagtataaatctccatcttgaagatataaaaagattcggggatgatatcctg
cttcagcttcgcccctag

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