Pseudomonas nunensis: NK667_22985
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Entry
NK667_22985 CDS
T08997
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00053
Ascorbate and aldarate metabolism
pnb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
NK667_22985 (garD)
Enzymes [BR:
pnb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
NK667_22985 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
UTO13018
LinkDB
All DBs
Position
complement(5209941..5211494)
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AA seq
517 aa
AA seq
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MQLIEHSDSPRYIRLHERDNVVIVVNDQGVPAGTEFPDGLVTVDFVPQSHKVTLEDIPEG
GQVIRYGQTIGYALQPIPRGSWVKEDQLRMPTAPPLDSLPLSTDVPASQAPLEGFTFEGY
RNADGTVGTRNILGITTTVQCVTGVLDHAVKRIKDELLPLYPNVDDVVALTHSYGCGVAI
TATDAYIPIRTVRNLARNPNLGGEALVISLGCEKLQAGQVMHDNDSSVDLSEPWLYRLQD
SSHGFTEMIEQIMALAETRLKKLDQRRRETVPASELILGMQCGGSDAFSGITANPALGYA
SDLLLRAGATVMFSEVTEVRDAIYLLTSRAETKEVAEELVREMDWYDRYLAKGEADRSAN
TTPGNKKGGLSNIVEKSLGSIVKSGSSAINGVLGPGERFKRKGLIFCATPASDFVCGTLQ
LAAGMNLHVFTTGRGTPYGLAMAPVVKVSTRTELAQRWPDLIDIDAGRIATGRASIEDLG
WELFHYYLDVASGKKQTWAEQHKLHNDITLFNPAPIT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgattgaacattccgactcgccgcgctacatccgcctgcacgagcgggacaat
gtggtgatcgtggtcaacgaccagggcgtgccggccggcaccgaatttcccgatggcctg
gtgacggtggattttgtgccgcagagccataaggtcaccctcgaggacattcccgagggc
ggtcaggtgattcgttacggccagaccatcggctacgccttgcagccgattccgcgcggc
agttgggtcaaggaagatcaactgcgcatgcccaccgcgccaccgctggacagcctgccg
ctgtccaccgatgtgccggcgagccaggcaccgctggaaggctttaccttcgagggttat
cgcaacgccgacggcaccgtcggcacgcgcaacatcctggggattaccacgaccgtgcag
tgcgtcaccggcgtgctcgatcatgcggtcaagcgcatcaaggacgagttgctgccgctg
tacccgaacgtcgatgacgtggtggcgctgacccacagttacggctgtggcgtggcgatc
acggccaccgacgcctacatcccgatccgcaccgtgcgtaacctggcgcgcaacccgaac
ctgggtggcgaagccttggtgatcagcctcggttgcgagaagttgcaggccgggcaggtg
atgcacgacaacgacagctcggtggatctgagcgagccgtggttgtatcgcttgcaggat
tcgagtcacggttttaccgaaatgatcgagcagatcatggcgctggccgaaacccgtctg
aagaagctcgatcaacgtcgccgggaaaccgtgccggcgtccgagttgatcctgggcatg
cagtgcggcggcagcgatgcgttttccggcatcaccgccaacccggcgctgggttatgcc
tcggacttgttgttgcgagcgggtgcgacggtgatgttttccgaagtcaccgaagtacgc
gatgcgatttacttgctgacgtcccgtgccgaaaccaaggaagtcgccgaggaactggtg
cgggaaatggactggtacgaccgttacctggccaagggcgaagcggaccgcagcgccaac
accacgccggggaacaagaagggtgggttgtcgaacattgtcgagaagtccctgggctcg
atcgtcaaatccggcagcagcgcgatcaatggcgtgctcggccctggcgaacgcttcaag
cgcaaaggcctgatcttctgcgcgaccccggccagtgattttgtctgcgggacgttgcaa
ctggcggcggggatgaacctgcacgtgttcaccaccgggcgcggtacgccgtatggtctg
gcgatggcgccggtggtgaaggtgtcgacccgaaccgaactggcgcagcgctggccggac
ctgatcgacatcgatgccgggcggattgcaactggccgggcttcaattgaggatctgggc
tgggagttgtttcactactacctggacgtggccagcggcaagaaacaaacgtgggccgag
cagcacaaactgcataacgacatcacgttgtttaacccggcgccgatcacgtaa
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