Pirellulimonas nuda: Pla175_34740
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Entry
Pla175_34740 CDS
T06953
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pnd
Pirellulimonas nuda
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnd03009
]
Pla175_34740 (rimO)
Enzymes [BR:
pnd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Pla175_34740 (rimO)
Ribosome biogenesis [BR:
pnd03009
]
Prokaryotic type
ribosomal protein modification factors
Pla175_34740 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QDU90074
UniProt:
A0A518DF08
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All DBs
Position
4410328..4411716
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AA seq
462 aa
AA seq
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MATPFTEQLQRADGPKGRYAFISLGCPKNLVDSERMLGLLQLDGYELTPDPQDADFAIVN
TCGFIEAARNESFAAIDEMLALKQSGQLRGVIVSGCLAERQKELLLVDRPGIDHLVGVFG
REEVTKVADRLIGGLEEQRLVFQPAPARPLDDNKRMRITPRHFAYLKISEGCDRLCTFCA
IPKMRGKHATKPMEAVLDEARELAADGVRELVIVAQDTTYYGKDLYGETRLAELLRQLDQ
VEGLDWVRLMYLYPMYFSDELIDVIAGSRRIVPYLDMPLQHASDRMLKRMQRRVNRADTE
TLLEKLRDRIPGVVMRTTMITGFPGETDADFEEMCGFVKQHRFERLGVFTYSLEPDTPAA
RLPDHLPEEVKDERRAELMAIQQQIAFDWADDQVGKQSDVLIDSPVPEQAGAWIGRSAAD
APDVDCVTYVSGEGLAPGQLVRCENVARSDYDLAAVAIAPPR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttggccactccattcacggaacaactccagcgcgccgacggcccgaaaggccgctacgcc
ttcatcagcctggggtgccccaagaacctggtcgacagcgagcggatgctggggctgctg
cagctcgacggctacgagctgacccccgacccgcaggacgccgacttcgcgatcgtcaac
acctgtggctttatcgaggcggcccgcaacgagtcgttcgccgcgatcgacgagatgctc
gcactgaaacaatctggccaactgcggggcgtgatcgtctccggctgcctcgccgagcgg
cagaaggagctgctgctggtcgaccgccccggcatcgaccacctggttggcgtgttcggg
cgggaagaggtaaccaaggtcgccgaccggctgatcggcggactggaggaacagcggttg
gtgttccagccggcgcccgcccggccgctggacgacaacaagcggatgcggatcacgccg
cggcacttcgcctacctgaagatctctgaggggtgcgaccggctttgcaccttctgcgcc
atccccaagatgcgcggtaagcacgccaccaagccgatggaggccgtgctggacgaggcc
cgcgagctggccgccgacggcgtgcgcgagctggtgatcgtcgcccaggacactacgtat
tacggaaaggacctgtacggcgagacccggctcgccgagctgctgcgccagctcgatcag
gtcgaggggctcgactgggtccgcctgatgtacctctacccgatgtacttcagcgacgag
ctgatcgacgtgatcgccggcagccggcggatcgtcccgtacctcgacatgcccctgcag
cacgccagcgaccggatgctcaagcggatgcagcggcgcgtcaaccgcgcggacaccgag
acgctgctggagaagctccgcgaccgcatccccggcgtcgtgatgcggaccaccatgatc
accgggttccccggcgagaccgacgccgacttcgaagagatgtgcggcttcgtcaagcag
caccggttcgagcggctgggggtgtttacctactcccttgaacccgacacgcccgcggcc
aggctgcccgaccacctgcccgaagaggtcaaagacgaacgccgcgcggagctgatggcc
atccagcagcagatcgccttcgactgggccgacgatcaagtcggcaagcagtcggacgtg
ctgatcgactcgccggtccccgaacaagcgggcgcctggattggccggagcgccgccgac
gcgccggacgtcgactgcgtgacctacgtctccggcgagggcctggcgccgggccagctc
gtccgctgcgaaaacgtcgcccgcagcgactacgatcttgcggccgtagcgatcgccccg
ccccgctga
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