Pseudoalteromonas nigrifaciens: PNIG_a0127
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Entry
PNIG_a0127 CDS
T05271
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00130
Ubiquinone and other terpenoid-quinone biosynthesis
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
png01240
Biosynthesis of cofactors
Module
png_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
PNIG_a0127 (ubiD)
Enzymes [BR:
png01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
PNIG_a0127 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ASM52470
UniProt:
A0AAC9UCN0
LinkDB
All DBs
Position
I:complement(109532..110998)
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AA seq
488 aa
AA seq
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MKYKDLRDFIDLLEKRGELKRITQEIDPYLEMTEIADRTLRAKGPALLFENPKGYDIPVL
ANLFGTPKRVAMGMGQEDVSELREVGKLLAFLKEPEPPKGIKEALGQIPVYKQVLNMPAK
EVKKAPCQEVILQGDEVDLTKLPIQHCWPGDAAPLITWGLTVTKGPYKKRQNLGIYRQQL
LGKNKIIMRWLSHRGGALDFQEWCKENPGQPYPVSVALGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVKSISNDLQVPASAEIVLEGYIMPGEMAPEGPYGDHTGYYNEVDDFPV
MTVTHMTHRKNPIYHSTFTGRPPDEPAILGVALNEVFVPILQKQFPEIVDFYLPPEGCSY
RMAIVTMKKQYPGHAKRVMMGVWSYLRQFMYTKFVIVCDDDINARDWEDVIWAITTRMDP
ARDTTLIENTPIDYLDFASPVSGLGSKMGMDATNKWPGETNREWGEPIEMDKATKDRVDD
IWQSLNIL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaaagatcttcgtgattttatcgatttacttgaaaaaagaggtgagcttaaa
cgcatcactcaagaaatcgacccgtatcttgaaatgaccgaaatagccgaccgtacatta
cgtgctaaaggccctgcgttattatttgaaaaccctaaaggttacgatattccggtattg
gctaacttatttggcacacccaagcgtgttgccatgggtatgggccaagaagatgtaagc
gaattacgtgaagttggcaagcttttggcttttttaaaagaaccagagccaccaaaaggc
attaaagaagcgctagggcaaatacctgtttataaacaagtgcttaatatgccagcaaaa
gaagtaaaaaaagccccctgccaagaagttattttacaaggtgatgaggtcgatttaact
aagctgcctattcaacattgctggccaggtgatgctgcaccgttaattacttggggcctt
accgttactaaagggccttataaaaagcgccaaaatttaggaatataccgccaacaactg
ttaggcaaaaataaaattattatgcgctggttgtctcaccgtggcggcgcgcttgatttt
caagaatggtgtaaagaaaatccaggccaaccgtacccggtatctgtggcattgggcgcc
gatccggcgactatattaggtgcagtaacccctgtacccgacacattaagcgagtacgct
tttgcaggcttactgcgcggcagtaaaactgaagtagttaaatcaatatcaaacgattta
caagtacccgcaagcgccgaaatagtacttgaaggctacataatgccaggtgaaatggcg
cccgagggcccatatggcgatcacactggatattataacgaagttgatgactttccggtg
atgacagtaacccatatgacccaccgtaaaaaccctatttaccacagtacctttaccggc
cgcccgcctgatgagcctgctattttaggggtggcattaaacgaagtatttgtacctatt
ttacaaaaacaattccctgaaattgttgatttttacttgccaccagaaggctgctcgtac
cgcatggctattgttaccatgaaaaaacaatatcctggccatgcaaaacgcgtaatgatg
ggagtgtggtcttacttacgtcaatttatgtataccaagtttgttattgtgtgcgatgac
gatattaacgcccgagattgggaagatgttatttgggcaattactacgcgtatggacccc
gctcgcgacaccactttaatagaaaacacaccaattgattatttagattttgcgtcaccg
gtttctggccttggctctaaaatgggtatggatgcaacgaacaaatggcctggcgaaaca
aaccgtgaatggggcgagccgattgagatggataaagccaccaaagatcgcgtagacgac
atttggcagagcctcaacattctctaa
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