Pseudoalteromonas nigrifaciens: PNIG_a3156
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Entry
PNIG_a3156 CDS
T05271
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00260
Glycine, serine and threonine metabolism
png00630
Glyoxylate and dicarboxylate metabolism
png00785
Lipoic acid metabolism
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
png01200
Carbon metabolism
Module
png_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PNIG_a3156 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PNIG_a3156 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PNIG_a3156 (gcvP)
Enzymes [BR:
png01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PNIG_a3156 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Pyridoxal_deC
BTRD1
Motif
Other DBs
NCBI-ProteinID:
ASM55088
UniProt:
A0A379H7V3
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All DBs
Position
I:complement(2893238..2896129)
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AA seq
963 aa
AA seq
DB search
MSNAKSLEQLEQTQDFIRRHIGPSPAQVSDMLSALEVSSVEELIGQTVPAGIRLEQPLTV
GESRTEVETLSYLKSVASKNKVFKSYIGQGYHPTHVPHVILRNVLENPGWYTAYTPYQPE
IAQGRLESLLNFQTMTLDLTGLDLASASLLDESTAAAEAMGLAKRVSKAKKANAFFIADD
VHTQTIDVVSTRAEQFGFEIIVGKAADAVNHEIFGALFQYPSTTGEVVDITDLIAGVQSK
KAIACVAADIMSLLLLKAPGKLGADVVLGSAQRFGVPMGYGGPHAAFFATRDAYKRSLPG
RIIGVSKDRLGNDALRMAMQTREQHIRRDKANSNICTAQVLLANMAAFYAVYHGPQGLKT
IAQRIHRFADILAAGLQAKGVSLKHNTWFDTLTVVSDSKADVIARALASGVNFATNRDGE
YSIAVSETTTRADVAQLFDIVLGEGHGLSVDAIAADIENNGSTSIPASLERDDEVLTHPN
FNSYHSETEMLRYIKRLENKDLALNHSMISLGSCTMKLNATAEMIPITWPEFSNLHPFCP
LDQAQGYQIMMGELHDWLVNITGYDAVSLQPNSGAQGEYAGLIAIRKYHESRGDAHRNVC
LIPSSAHGTNPASAQMASMKIVVVDCDKNGNVDMADLKAKAEAVAENLSCIMITYPSTHG
VYEETIREICDIIHQHGGQVYMDGANMNAQVGVTSPGFIGSDVSHLNLHKTFCIPHGGGG
PGVGPIGVKSHLAPFMPNHSIINVPGTNEGNGAVSAAPYGSASILPISWAYITMMGSEGL
KQATEMAIVNANYLTHELSKHFPILYRGRNNRVAHECIVDLRPLKELSGITEMDVAKRLQ
DYGFHSPTMSFPVAGTLMIEPTESESKVEIDRFIEAMVSIKSEIDKVISGEWSIENNPLV
FAPHTQGDVLGNEWDRAYDRFYAAFPVPSVAKNKFWPTVTRIDDVYGDRNLVCACPPVET
YRD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgccaaatctcttgagcagttagagcaaacgcaagattttattcgccgccat
attgggccaagcccagcgcaagtaagcgatatgcttagcgcgcttgaagtatcgagtgtt
gaagagctgatcggtcaaactgtacctgcaggtattcgccttgagcagcctttaaccgtg
ggcgaaagccgcaccgaagttgaaacactaagctacttaaagtcagtagcaagcaaaaat
aaagttttcaaatcgtatattggccaaggctaccacccaacacatgtaccgcacgtaatt
ttacgtaacgtactagaaaacccaggttggtatactgcgtacactccatatcagccagag
atagcgcaagggcgtttagagtcgctacttaactttcaaactatgaccctagatttaacc
ggcctagatttagcaagtgcatcgttacttgacgaatcaaccgctgcagcagaggctatg
ggccttgcaaaacgtgtatctaaagcgaaaaaagccaatgcattttttattgccgacgac
gtacacacacaaacaattgacgtagtaagcacccgcgccgagcagtttggttttgaaata
attgttggcaaagcagccgacgctgttaaccatgagatttttggcgcgttatttcaatac
ccatcaacaactggtgaagtggtagacattaccgacctaattgctggcgtacaaagcaaa
aaggcaattgcctgtgttgctgccgacattatgagtttattactattaaaagcaccgggt
aaattaggcgcagacgtagtattaggttcagcacagcgttttggtgtacctatgggttac
ggcggtcctcacgctgcatttttcgcaacgcgtgatgcatacaaacgttcattaccaggt
cgtattattggcgtatctaaagaccgtttaggtaacgatgcactgcgtatggcaatgcaa
acgcgtgagcaacacattcgccgcgacaaagccaactcaaacatttgtaccgcgcaagta
ttactggccaacatggcagcgttttacgctgtgtaccatggcccacaaggcttaaaaact
attgctcagcgtattcatcgctttgccgatattttagctgcaggcttacaagctaaaggc
gtgagccttaaacacaacacctggtttgataccctaacggtagtaagcgatagcaaagcc
gacgttattgcgcgtgcactagcaagcggtgttaactttgctactaaccgcgatggcgaa
tactcaattgccgtatcagaaaccaccacacgtgcagacgtagcgcagttatttgatatt
gtattaggcgaaggccatggcctaagtgttgatgcaattgcagccgatattgaaaacaat
ggcagcacgtcaattccagcaagcttagagcgtgatgacgaagtattaacgcaccctaac
tttaattcgtaccacagcgaaactgaaatgctgcgttatattaagcgcctagaaaacaaa
gatttagcgcttaaccactcaatgatctcgttaggttcatgtaccatgaaactaaacgcg
actgctgagatgatcccaattacctggcctgaattttcaaacttgcacccattttgcccg
ctagatcaagcacaaggctatcaaattatgatgggcgaactgcatgattggttggtaaac
attaccggttacgatgcggtttcattgcaacctaactcaggtgctcaaggtgaatacgca
ggcttaattgccattcgtaaataccacgagtcacgcggcgacgctcaccgtaacgtatgt
ttaattccaagctcggcgcatggtactaacccagcgtcggcacaaatggccagcatgaaa
attgtggtggttgattgtgataaaaacggtaacgtagacatggccgatcttaaagcgaaa
gcagaagcggtagccgaaaacttatcgtgtattatgatcacttacccatctacacacggc
gtatacgaagaaacaattcgtgaaatttgcgatattattcatcagcacggcggccaagtt
tacatggacggcgcaaacatgaacgcgcaagttggcgtaactagcccaggctttattggc
tcagacgtatcgcacttaaacttgcataaaaccttttgtattccacacggtggcggtggt
ccaggtgttggcccaattggtgttaaatcgcaccttgcgccatttatgcctaaccacagc
attattaacgtaccaggtactaacgaaggtaacggagcggtatcggcagcgccatatggt
tcagcgtctattttacctatttcgtgggcttacattaccatgatgggctcagagggctta
aaacaagccactgaaatggcaattgtaaatgctaactacttaacgcatgagctaagcaag
cactttccaattttataccgtggccgtaacaaccgtgttgcgcacgaatgtattgttgac
ttgcgtccgcttaaagagttgtcgggtattactgaaatggacgtagctaaacgcctacaa
gactacggtttccattcacctactatgtcgttcccagtagcgggcacgttaatgatagag
cctaccgagtctgagtctaaggttgagatcgaccgcttcatcgaagcaatggtgtcaatt
aagagcgaaatcgacaaagtaatctctggcgaatggtcaatcgaaaacaacccgttagtg
tttgcaccgcacacccaaggcgacgtgttaggtaacgaatgggaccgtgcatacgaccgt
ttttacgcagcattcccagtgccaagcgtggctaaaaacaagttctggccaaccgtaaca
cgtattgacgacgtatacggcgaccgtaacttagtgtgtgcttgcccaccggttgagaca
taccgcgattaa
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