Parastagonospora nodorum: SNOG_01497
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Entry
SNOG_01497 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pno
Parastagonospora nodorum
Pathway
pno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SNOG_01497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pno03021
]
SNOG_01497
Enzymes [BR:
pno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SNOG_01497
Transcription machinery [BR:
pno03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SNOG_01497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Zea_mays_MuDR
Motif
Other DBs
NCBI-GeneID:
5968980
NCBI-ProteinID:
XP_001792135
UniProt:
Q0V3B7
A0A7U2F0N7
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MEAPRTSAKQQVVDRIPARIKHIQFGIYSNQDIVNQAVIEVSDRNVYDLTPAADNTRALT
ANGPMDPLMGISSKTGECGTCGEKLDKCNGHFGHIKLALPAFHVGYLKHIIEVLNCICKD
CSRVLLDEVERRRYLRSMRRPDMDTLRRTAISKKVLEDCRKKKTCPYCDALQGTVRKVPG
HPLKIIHNRYDAFNRSTAKTKKPPAGKIEFDQSFETAKAANPDLDKHLKKAVDDMHPLRT
LNLFKKISPEDCELLAMIPEDARPEMLIWEYMPVPPVALRPSVMQEGGATEDDVTNKIGD
ICQISSIIRAGLARGFPLQILMEQWDFLQLQIAMYINSDAPGLKQQGLQKTMRGFSQRLK
GKGGRFRQNLSGKRVDFSGRTVIGPDPNLSIDEVAVPQRVAKILTYPEKVTRYNIKKLQK
LVLNGANKYPGANYILKDLGPDQDPRKVSLIALSRHDKKGDRLQGPAAALRFGDVVERHL
EDGDIVLFNRQPSLHKLSILSHRAKIRPWRTFRLNECVCNPYNADFDGDEMNLHVPQTEE
ARTEATELMGVKYNLATPKNGTPIIAAIQDFITAAFILSNKSNFYDRRTFCQIVNYMFTG
EGAYDPDTGKYLPIEIPPPVIWKPQALWTGKQVFNLLMRPNKQSRVLVNLEAGCKQYKPV
QGRAPDLDENDAYLIIRNSEVMCGVMDKSTVGDGKKESVFYVMMRDFGPEHAVQGMNRLA
RLSARWLTNNGFSLGISDVTPGEVLNQKKQALVEEAYAKCDKLIKDFKEGKLQRAAGCDE
EQTMEVQIGGILSGVRQAAGDICFEELSRWNSPLLMAKCGSKGSNINVSQMVASVGQQMI
GGARVADGFHHRTLPHFPKAARQPAAKGFVSNSFYSGLTPSEFIFHAMSGREGLVDTAVK
TAETGYMSRRLMKSLEDLSAQYDDTVRNSSGTVVQFQYGDDNLDPVDMEGRAQPVAFDRT
FSHAITSTWDNSEPSLTPEAVRAHTLAKLNTERNKYPRFKLDGITPLEYNDKSDSSIDQK
ESLRDFLDTVQTYISGKAQKLETTLVHLGVSLEDCSTKRSEADREKYTLADGIAKISQTA
LDTFIDLCLTKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQGVPRI
KEIINASSTISTPVITCVLSNKISESAARIVKARVEKTYLRDIINYVEDVWHPTGAYVAM
RIDWDTVNALFVDITPHEIVNAINKHKPLKWGKAGTKVRISSSLIRVEIADPSASKKRPA
AKASKNHKEYFERVQQVKNLIPHVVIKGYDGCTRAIIKKETTPNKNGDYECELLVEGYGL
KDCLTTPGIEPYKTMSNHVMEVRTVLGIEAARATIMREISAVMGNMDIDPRHMALLADVM
TFKGDVYGITRFGLQKTRDSVLQLASFEKTPDHLFEAAARGKTDTIDGVSESIIMGQSMK
LGTGALQVVRPLKLGEEDLAKKRTMFEEGWDAL
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgcgcacctcggcgaagcagcaggtcgtggaccgcattcccgcgcgcatc
aagcacatccagttcggcatctactccaaccaggacattgtgaaccaggccgtcatcgaa
gtctccgaccgcaatgtctacgacctcacccctgccgcggacaacacgcgcgcgctcact
gccaacgggcccatggacccgctcatgggcatctcaagcaagacgggcgaatgcggaact
tgtggcgagaagctggacaagtgcaatggccacttcggacacatcaagctggcgctgccg
gcattccatgtggggtatctgaagcacatcatcgaggtgctgaactgcatctgcaaagac
tgttcgcgggtgctgctggatgaggtagagcgacggaggtatttgcgcagcatgcgccga
ccagacatggacacgctgcggaggacggcaatctcgaagaaggtgctggaggactgtcgc
aagaagaagacatgtccatactgcgatgcgctgcagggaactgtgcgaaaagtgcctggc
cacccgctcaagatcatccacaaccgctacgatgccttcaatcgctcaaccgccaagacg
aagaagccacctgcgggcaagatcgaattcgaccagtcttttgagaccgccaaagctgcg
aaccccgacctggataagcatctcaagaaagctgtagacgacatgcacccgctgcggacg
ctcaatctgttcaaaaagatctcacccgaagactgtgaattattagctatgatccccgag
gatgcgcgccccgagatgttgatctgggagtacatgcctgtaccgcccgtggctctccgg
ccctctgtcatgcaagagggtggcgcgaccgaggacgatgtcacaaacaagatcggagac
atatgtcaaatcagcagcatcattcgcgctgggcttgctcgaggattccctttgcagatt
ctgatggaacaatgggattttctgcaactgcagattgccatgtacatcaacagcgacgcg
cctggactgaaacagcagggtttacaaaagacaatgcgcggattctcacagaggctgaag
ggaaagggcggccgtttccgtcagaatttgtctggaaagcgtgtcgacttttctggccgt
actgtcatcggaccagatccgaacttgagcattgacgaggtggcggtgccgcagcgggtc
gccaaaattctgacgtaccccgagaaagtcacaagatacaatatcaaaaagctgcagaag
cttgtcctgaatggtgccaacaagtatcccggtgccaattacattctcaaagacctaggt
ccggatcaagacccgcgcaaggtatccttgattgcgctctcgagacacgacaagaaaggc
gatagactgcagggacctgcggccgcgctgaggttcggcgatgtcgtcgaacgccatctc
gaggacggcgacattgtgctctttaatcgacaaccctccctacacaagctcagtattttg
agtcatcgagccaagatccgtccatggcgaacgttccgactcaacgagtgcgtctgtaac
ccgtacaatgccgatttcgatggcgacgagatgaatttgcatgttcctcagactgaagag
gcacgaacagaagccactgagctcatgggcgtcaagtacaatctggccacaccaaagaat
ggaaccccaatcattgcagcgattcaagatttcatcactgctgcttttatcctgagcaac
aagagcaacttctacgaccgacggacattctgtcagattgtcaactacatgttcacagga
gagggtgcctatgacccggacacgggcaaatacctgcccatcgagatacctccaccagtc
atctggaagccacaggcactttggacagggaaacaagttttcaatttactcatgagaccc
aataagcagtccagggtccttgtcaacctcgaagctggttgcaaacaatataagcctgtc
cagggacgcgctcccgacctagatgagaatgatgcttaccttatcattcggaactcggaa
gttatgtgcggtgttatggacaagtccaccgttggtgacggtaagaaggaatctgtcttc
tatgtcatgatgcgagatttcgggcccgagcacgctgtgcagggcatgaatcgacttgca
aggctctctgcgcgctggctgaccaacaacggtttctcgctcggcatcagcgatgtcacg
cctggagaagttttgaaccagaagaagcaggctttagttgaggaggcatacgcgaaatgt
gacaagctcatcaaggatttcaaagagggtaaacttcaacgcgccgcagggtgtgacgaa
gaacagaccatggaagttcaaattggtggtatcctttctggtgttcgtcaggcggccggt
gacatctgtttcgaagagctcagcagatggaactcgccactcctgatggccaagtgcggg
tctaaaggttccaacatcaatgtttctcagatggtagcctccgtcggacagcagatgatt
ggtggcgcgcgtgtcgccgatggcttccaccatagaacccttcctcattttccgaaagcg
gctcgtcaaccagctgccaagggtttcgtcagcaacagtttctactccggtcttactcca
tccgagttcatctttcacgccatgagtggtcgtgagggtctggtcgatacagcagtcaag
acggctgaaactggttacatgagtcgacgtcttatgaagtcactggaagatctttctgca
caatacgacgacaccgtgcgcaactcatcaggaaccgttgttcaatttcagtatggagac
gataacctagaccctgttgacatggagggtagagcgcagcccgtggctttcgaccgcact
ttctcgcacgccatcacttcgacttgggacaatagcgaacccagtcttacccctgaagca
gtccgtgcacacactttagcaaaactcaataccgagcgaaacaaataccctcgctttaaa
ctggacgggatcacgccactcgagtacaacgacaagagcgacagtagtatcgaccagaaa
gaatcgttgcgagactttttggacacagtgcagacttacatctctggtaaggcacagaag
ctagagaccacgctggtgcacctcggcgtcagtctagaggactgcagcacaaagagatcg
gaagcggatagggaaaagtacactctcgcagatggcattgccaagatctcacagactgcg
ctggacacgttcatcgatctgtgtctgacaaagtatcatcgctcgcgtgtgcagccaggt
cacgcagtcggagctatcggtgcacagtccattggtgagcctggcacacagatgacactg
aagactttccattttgctggtgtcgctggtatgtcaattacccaaggtgtacctcgtatc
aaggaaatcatcaacgcatcttctaccatctcaacgcctgtcattacttgcgtcctttcg
aacaaaatcagcgaaagcgccgctcgaatcgtcaaggcgcgcgttgagaagacatacctc
cgcgatatcatcaattatgtcgaagatgtctggcatccgaccggcgcttacgtcgctatg
cgtatcgactgggacaccgtgaacgctctgttcgtcgatatcaccccacacgagattgtt
aatgccatcaacaaacacaagcctctcaaatggggtaaagctggcaccaaagtacgcatc
tcatcatctttgatccgcgtcgaaatcgccgacccatctgcttctaagaagcgtcccgcc
gccaaagccagcaagaaccacaaggagtatttcgaacgtgtccaacaagtcaaaaatctg
ataccccatgtcgtgataaagggttacgatggctgcactcgcgctatcatcaagaaagag
actacgcctaacaaaaacggcgactatgaatgtgaattacttgtcgagggatacggacta
aaggactgtttgacaacgccaggtattgagccctataagaccatgagcaatcacgttatg
gaagttcgcacagttctcggcattgaagctgcccgcgcgaccatcatgcgcgaaattagt
gctgtcatgggaaacatggacattgatccgcgtcatatggcgttgcttgccgatgttatg
acgttcaagggtgacgtttacggcatcacgcggttcggtctgcaaaagacgcgcgactcg
gtgctgcagctggcgtctttcgagaagacgcctgaccatctattcgaggcggcggcgaga
ggcaagacggatacgattgatggtgtgagcgagagtatcatcatgggacagagcatgaag
ctgggtactggagcactgcaagtggtcaggccattgaagctgggtgaggaagacctagca
aagaagaggaccatgttcgaggagggatgggatgcgttgtaa
DBGET
integrated database retrieval system