Pseudomonas nitroreducens: G5B91_09600
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Entry
G5B91_09600 CDS
T08828
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pnt
Pseudomonas nitroreducens
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnt03009
]
G5B91_09600 (rimO)
Enzymes [BR:
pnt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G5B91_09600 (rimO)
Ribosome biogenesis [BR:
pnt03009
]
Prokaryotic type
ribosomal protein modification factors
G5B91_09600 (rimO)
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Ortholog
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Gene cluster
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Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
CLP1_P
DUF5005
DUF4249
Peptidase_A4
Motif
Other DBs
NCBI-ProteinID:
QIE86512
UniProt:
A0A6G6IU30
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All DBs
Position
complement(2039115..2040437)
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKAE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAQRL
VKAGVKELLVISQDTSAYGVDLKYKMDFWDGQPVKTRMLELCQALSSMGVWVRLHYVYPY
PNVDDVIPLMAEGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEDDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEVVPDDVKQDRW
ERFMAHQQAISAARLQLKIGKEIDVLIDEVDDEGAVGRSYADAPEIDGAVYIDSFDVKPG
DKVRVRITDADEYDLWAELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacacccaaagtaggattcgtctcgctcggatgcccgaaagcgactgtc
gactccgaacgcatcctcacccaactgcgcatggaagggtacgaaatcgtccccacctac
caggacgcggacgtggtggtggtgaacacctgcggcttcatcgacagcgccaaggccgaa
tccctggacgccatcggcgaagccatcgccgagaacggcaaggtgatcgtcaccggttgc
atgggcgtggctgaagacagcattcgtgacgtgcaccccagcgtgctggccgtgaccggc
ccgcagcagtacgagcaggtggtcaatgccgtccacgaggtgattccgcccaaggccgaa
cacaacccgctgatcgacctggtgccaccgcagggcatcaagctgaccccgcgccactac
gcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatcccgtcg
atgcgcggcaagctggtcagccgcccggtgggcgacgtgctcagcgaagcccagcgcctg
gtgaaagccggtgtgaaggaactgctggtgatctcccaggacaccagcgcctacggtgtg
gacctgaagtacaagatggacttctgggatggccagccggtgaagacccgcatgctggag
ctgtgccaggcgctctcctcgatgggcgtatgggtgcgcctgcactatgtttacccgtat
cccaacgtcgacgacgtgatcccgctgatggccgagggcaagctgctgccctacctggac
atccccttccagcacgccagcccgaaagtgctcaagtccatgaagcgccccgccttcgag
gacaagaccctggcgcgtatcaagaagtggcgcgagatctgccccgagctgaccatccgc
tccaccttcatcgtcggcttccccggcgagaccgaggacgacttccagtacctgctcgac
tggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactccccggtggaaggc
gccccggccaacgacctgggcctggaagtcgtccccgatgacgtcaagcaggaccgttgg
gagcgcttcatggcacaccagcaggccatttccgccgcacgcctgcagttgaagatcggc
aaggaaatcgacgtgctgatcgacgaagtggatgacgaaggcgcggtcggccgctcctac
gccgacgccccggaaatcgacggcgccgtgtacatcgacagcttcgatgtgaagccgggc
gacaaggtgcgcgtgcgcatcaccgacgccgacgagtacgacctctgggccgaactggtc
tga
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