KEGG   Paenarthrobacter nicotinovorans: JMY29_08665
Entry
JMY29_08665       CDS       T08055                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pnv  Paenarthrobacter nicotinovorans
Pathway
pnv00740  Riboflavin metabolism
pnv01100  Metabolic pathways
pnv01110  Biosynthesis of secondary metabolites
pnv01240  Biosynthesis of cofactors
pnv02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pnv00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JMY29_08665 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JMY29_08665 (ribD)
Enzymes [BR:pnv01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JMY29_08665 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JMY29_08665 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD XOO_2897-deam
Other DBs
NCBI-ProteinID: UKF05625
LinkDB
Position
1860565..1861704
AA seq 379 aa
MSAQAVEFSATEKAAMDAALTAALAGPRGANPLVGAVILGAEGEQLATGYHRGAGTAHAE
ADAISEARRQGIDTKGTTMVVTLEPCNHVGRTGPCAQAIIAAGIAKVIYAVDDPHDPAAG
GAKTLRAAGIDVTSGLGYDESLDLNREWFDAVAAKRPFVTLHIAQTLDSRIAAVDGTSQW
ISSAESLADNHALRRLIDAILVGTGTVLIDNPRLTARTPDGELSQRQPVRAVMGLRDVPE
GAAVRGTDGRFRHLPTRDPAEALGMLFEEGVRHVMVEGGSSILSTFLAAELVDELIVYLA
PTLLGSGTPALNDLGIGTLAEAQHWAWDEASGGPVRTLGNDLRLHLRPAGRAANTTKNSI
PQKNMVSRSDAAEYVTGGH
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgagcgcgcaggccgttgagttttcggctactgaaaaggccgccatggacgcagctctc
accgccgccctggctggcccgcgaggagcgaatccgctggttggcgcagtgatcctcggc
gcggaaggcgagcaacttgccaccggctaccatcgcggtgccggaacggcccatgcggag
gccgacgccatctccgaagcccggcgccagggaatcgacaccaagggcaccaccatggtg
gtcaccctggagccttgcaaccatgtaggccggacaggtccctgtgcccaggcgatcatt
gcagccggcatcgcaaaggtgatctacgccgtcgacgatccgcacgaccccgccgccggc
ggtgccaagacgctgcgcgcggcaggaatcgatgtcacgtccgggctcggctacgacgaa
tccctggacctgaaccgggaatggttcgacgccgttgccgccaaacgcccgttcgtcacc
ttgcatattgcacagaccctggacagccggatcgctgcggttgacggcaccagccagtgg
atctccagcgcagagtcgctggcagacaaccacgccttgcggcgcctgatcgacgcgatc
ctcgtagggaccggaaccgtgctcatcgacaacccccggctgacggcgcgcactcctgac
ggtgaactttcccaacgccagcccgtccgggcagtcatgggcctgcgggatgtcccggag
ggggcagcggtacggggaaccgacggccgcttcaggcatctgccaacccgggatccagca
gaggccctgggcatgctcttcgaagagggtgtccggcatgtgatggtcgaagggggttcg
agcattctgagtaccttccttgcggcggagttggtggacgagttgattgtctacctggcg
ccgaccctgctggggtccggtactccggcgctgaacgacttgggtatcggcacgctcgcc
gaagcccagcactgggcgtgggacgaggcatcagggggtccggtacggaccctcggcaac
gacctgcggctccatctccgtccagccggacgtgctgccaacaccactaagaattcgatt
ccgcagaagaatatggtttcacgcagtgacgccgcggaatatgtcacaggaggacactga

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