Pseudodesulfovibrio nedwellii: SYK_07110
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Entry
SYK_07110 CDS
T09024
Name
(GenBank) hypothetical protein
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00270
Cysteine and methionine metabolism
pnw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SYK_07110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnw03000
]
SYK_07110
03032 DNA replication proteins [BR:
pnw03032
]
SYK_07110
03036 Chromosome and associated proteins [BR:
pnw03036
]
SYK_07110
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pnw02048
]
SYK_07110
Enzymes [BR:
pnw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SYK_07110
Transcription factors [BR:
pnw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SYK_07110
DNA replication proteins [BR:
pnw03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SYK_07110
Chromosome and associated proteins [BR:
pnw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SYK_07110
Prokaryotic defense system [BR:
pnw02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SYK_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
BDQ36351
LinkDB
All DBs
Position
748001..749146
Genome browser
AA seq
381 aa
AA seq
DB search
MNLRYGSICSGIEAASVAWEPLGWKPVFFSEIEKHPSNVLRYHWPDIPNLGDFTAIAGKD
HDIDVLVGGTPCQAFSVAGRRQSLEDDRGNLTLKFVELVHESDVPIAIWENVPGVLNTED
NAFGCLLSGLVGSDTTLVPLKDGGWPCFGMVAGPQRVVAWRVFDAQYQRVAQRRRRLFLV
SFRTGDGRNPGAVLFEPESLPRDTAPRRKKGERIAPTITGGPPFSRTGNSRVESEAMVTG
TFRMTAFGEYVADDSASTVKARDYKDATDLIAFNWQNAGNDGLAIVEDGTGPLDCSQTKA
ICFFDDEKRRMRVRRLMPIEGERLQGFPDNHTKYGRTKDGNEYELADGPRYMVIGNSMAV
PCMAWIGRRIEKVLEATQYSK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacgctatggctccatctgttccggtatcgaggccgcttccgtggcctgggaa
ccgctcggctggaagcctgtctttttctctgaaatcgaaaagcacccctcgaacgtgctt
cgctatcactggcccgatatcccgaacctcggagacttcaccgccattgctggcaaagat
cacgacattgacgtgcttgtcggcggaactccttgccaagcattcagcgtggccggtcgc
cgacagtctcttgaagacgatcgagggaacctcacactcaaatttgtggagcttgtacat
gaatcagatgtccctattgccatttgggaaaacgtccccggagtcctcaacacagaagat
aacgctttcggctgcctcctctctggacttgttggatcagacaccaccctcgtaccgctt
aaagacgggggctggccttgtttcggcatggttgccggaccacaaagggtcgtggcgtgg
cgggtttttgatgcgcaataccagcgagtggcccagcgtaggcggaggttgttcctcgtt
agcttccgaactggtgacgggagaaatcccggagcggtactttttgagcccgaaagcctg
ccgagggatactgcaccgcgccgaaaaaagggcgaaagaattgccccgacaattacagga
ggccctcctttcagtcgcacaggaaatagccgcgtagaaagtgaggcgatggttaccggt
acattccgaatgaccgccttcggagagtatgtggctgatgattcagcttctacagttaag
gccagagactataaagacgcaacggatttgattgccttcaattggcagaatgccgggaat
gatgggcttgccattgttgaagatggcaccgggccccttgattgttctcaaacaaaagca
atctgttttttcgatgatgaaaaacgaaggatgcgtgttcgaaggctcatgccgatcgag
ggggagcggctccaaggttttccagacaaccacacaaaatatggtcgtacaaaagacggg
aatgaatatgagctggcagatgggcctcgctacatggttattggcaactccatggctgtg
ccgtgcatggcttggataggccgtcgaattgagaaggtcttggaagcaacacagtattca
aaatag
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