KEGG   Pseudodesulfovibrio nedwellii: SYK_29410
Entry
SYK_29410         CDS       T09024                                 
Name
(GenBank) type II/IV secretion system protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
pnw  Pseudodesulfovibrio nedwellii
Pathway
pnw02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pnw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SYK_29410
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnw02044]
    SYK_29410
   02035 Bacterial motility proteins [BR:pnw02035]
    SYK_29410
Enzymes [BR:pnw01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SYK_29410
Secretion system [BR:pnw02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   SYK_29410
Bacterial motility proteins [BR:pnw02035]
 Pilus system
  Pilus assembly proteins
   SYK_29410
SSDB
Motif
Pfam: T2SSE AAA_16 ABC_tran AAA_7 Sigma54_activat AAA_23 AAA_29 nSTAND3 cobW Sigma54_activ_2 AAA_22 Zeta_toxin Septin AAA_28 FtsK_SpoIIIE AAA_19 AAA_2 PCMT ATPase TsaE AAA_25 TrwB_AAD_bind SpoVIF KAP_NTPase
Other DBs
NCBI-ProteinID: BDQ38581
LinkDB
Position
3210308..3211711
AA seq 467 aa
MNLADRLNRNAAKRGSVVVDKGKARGKAVSSSISKTEAQEHYFDIKTRIHDRLIDMIDLS
LLDSLSEMEMRSEIAKVTEGLLWEEFQNAPLNLAERKRMLAEIQDEVIGLGPLEPFVQDP
TVNDILVNGYKQIYVERSGKLELTPARFKDDDHLRKIIDRIVSLVGRRIDESQPLCDARL
LDGSRVNAVIPPLAIDGPSLSIRKFSKDPLEIADLIGFNSLTQQMAQLMEGIVEAQLNVL
ISGGTGSGKTTLLNCMSRNVPEDERVVTIEDAAELQLKQAHVVRLETRPANIEGKGEITM
RDLVKNCLRMRPDRIIVGEVRSSEALDMLQAMNTGHDGSLTTIHANTPRDALMRLETMIS
MAGLSLSPISMKRYISSAIDVIIQATRLVDGTRKVISIQEVTGMEGEMITMQEIFAYDQT
GVSKDGKVEGRFTARGIRPKFADKLERMGFSFPTDMFHVAPKPMRKE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgaacctcgcagatcgattgaatagaaatgccgccaagcgtggctctgttgtcgtagat
aaaggcaaggctcgcggtaaggctgtctcttcgtctatttccaaaactgaggcgcaggaa
cattattttgatatcaagactcgcattcatgatcgtcttatcgacatgatcgatctgtcg
ttgttggattccctgagcgaaatggaaatgcggtcggaaatcgccaaggttaccgaaggg
ttgctttgggaagaatttcagaatgcgccgttgaatctggctgaacgcaagcggatgctg
gctgaaattcaggatgaggttattggtctcggtcctctggagccttttgttcaggatcct
acggttaacgatattttggtcaacggctacaaacagatttatgttgagcgttcgggcaag
ttggaactgactccggctcgcttcaaggatgacgatcacctgcgtaagattattgaccgt
atcgtgtctttggtaggacgccgtattgatgaatcccaacctttgtgtgacgcccgtctg
ctggatggctcacgtgtcaacgcagttattccgccgttggctatcgacggcccttcgctg
tccattcgtaagttttccaaggatccattggaaattgctgatttgatcgggttcaactct
ctgacccagcaaatggctcaactcatggaaggcatagtcgaggcccagcttaacgtgctt
atttcaggcggtaccggttccggcaagaccacgctcctcaactgcatgtcacgtaacgtg
cccgaagatgaacgagtcgtcaccattgaggacgccgcagaattgcaactcaagcaggct
catgtcgtccggctggaaacccgaccggccaatatcgaaggcaagggcgaaatcaccatg
cgtgatttggtcaagaactgtctgcgtatgcgccctgatcgcatcatcgtaggtgaggtt
cgttcctccgaggctttggatatgctccaagccatgaacaccggtcatgatggctccctg
acgactattcacgccaatacgccgcgtgacgccttgatgcgtctggaaaccatgatttcc
atggccggattgagtctttcacctatatcaatgaagcggtatatttcttcggccatcgac
gtcatcattcaggcaactcgtttggtggacggtaccagaaaggtcatctccattcaggag
gtcacaggcatggaaggtgaaatgatcaccatgcaggaaattttcgcctatgatcagacc
ggcgtcagcaaggatggcaaggtggaagggcgttttactgctcgcggtattcgtcccaag
tttgcggacaagctggaacgtatgggattttctttccccacggatatgttccatgtggct
cccaagcccatgaggaaggagtaa

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