Pseudodesulfovibrio nedwellii: SYK_31360
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Entry
SYK_31360 CDS
T09024
Name
(GenBank) acyl-CoA synthetase
KO
K24012
acetate---CoA ligase (ADP-forming) [EC:
6.2.1.13
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00010
Glycolysis / Gluconeogenesis
pnw00620
Pyruvate metabolism
pnw00640
Propanoate metabolism
pnw01100
Metabolic pathways
pnw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SYK_31360
00620 Pyruvate metabolism
SYK_31360
00640 Propanoate metabolism
SYK_31360
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pnw01004
]
SYK_31360
Enzymes [BR:
pnw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.13 acetate---CoA ligase (ADP-forming)
SYK_31360
Lipid biosynthesis proteins [BR:
pnw01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
SYK_31360
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GFIT
Motif
Pfam:
ATP-grasp_5
Succ_CoA_lig
CoA_binding_2
Ligase_CoA_2
CoA_binding
ATP-grasp_2
CPSase_L_D2
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
BDQ38776
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Position
3425495..3427609
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AA seq
704 aa
AA seq
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MTVDTNLYAFFSPDTVAVIGASATPGKVGHTIVSNMIEAGFKGKLFPVNPKGGEIQGLPV
ITDIADLPHGLDLGVISVPPQYVIPAIEALGERGAKSAIVITAGFKEAGKDGYLLEQEII
AMSEKYGIAILGPNCLGMMNSAHGVNASFAAGHPTPGSIAFFSQSGALCVAILDWALGAN
IGFSKFISLGNKAVLDEADMLDYLNKDEETKVILGYIENVEHGESFLKAARKTCLNKPVI
MIKSGTTAAGAKAASSHTGAIAGSDQSYSAAFHQSGVIRVGDVASLFNLAQAFSSQPLPK
GPNLAVVTNSGGPGILTADAADRSRLTMAALSQKTIQRLQKFLPSYAAFYNPVDIIGDAD
AKRYRQALDVVSEDPMVHSILVLLTPTASVEIEQTAEAVIRMARKCGKPVFACFMGKTRV
APARKLLMDAGIPCYAFPEPAVHSIEAMYSYYLWKNRPKPEYIEVNRDLEQAREVVREHM
RRNQPEIVEFEAQQVLKAYGLPTPQTVLARSSDEAVAAAEEIGYPVVLKIASPDISHKSD
VGGVKVNLWNATEVMKTFKSITAKAQRMRRDAYIAGCLVQEMAPPGVKEVIIGFKRDEEF
GPMLMFGLGGIYVEIMKDISFKLAPLSRQDSFEIVREIKSYMLLKGLKGEKPVNFTALEE
IIMVMSRLAIDLPEVWEAEFNPVLVNHERAIVADVRMTLHLKDK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgttgataccaatctgtacgcttttttttctcctgacacagttgctgtgatcggg
gcttccgccactcctggcaaggtggggcacaccattgtctccaacatgattgaagccggg
tttaaaggtaaactcttccccgtgaatcccaagggcggagagattcagggattacccgtc
ataacggatattgccgatttgccacacgggcttgatctcggtgttatttccgtgccgcca
cagtatgttattccggccattgaggcccttggcgagcgaggggcaaaatccgctattgtc
atcacagctgggttcaaggaagctggtaaggacgggtatcttctggagcaggaaatcatc
gctatgtccgagaaatacggcatcgcgatactcggtcccaactgtcttggcatgatgaat
tcggcccacggcgttaatgcgtcctttgctgcagggcaccccactcccggttctatcgct
tttttttcgcagtccggagcattgtgcgtggcaattcttgactgggcgctcggggcgaat
attggtttttccaagtttatatccttgggcaacaaagccgttcttgatgaagcggacatg
ctcgattatctcaacaaggacgaggagacaaaggtcatcctcgggtatattgagaacgtg
gagcatggtgagtctttcctcaaggcggcgcgtaagacctgtttaaataagccagttatc
atgataaagtccggtacgactgctgccggagccaaggctgcttcgtcgcataccggagcc
attgccggttccgatcagtcgtattcggccgcgtttcatcagtccggtgtgattcgggtg
ggagatgtggcatcgctgtttaatttagcacaggcgttttctagccagcctttgcccaaa
ggaccgaatctggcagtcgtgaccaactccggcggtcctggtattttgactgcggatgca
gcggatcgttctcgcttgactatggcagccttgtcgcaaaagacgattcagcggcttcag
aaatttcttcctagctacgcggctttttacaatccggttgatatcatcggtgatgctgac
gctaaacggtataggcaggctttagacgtagtttccgaagatccaatggtccattccatt
ctggtgttgctcacaccgacggcttcggtagagattgaacagacggctgaggcggtcatt
cgcatggccagaaagtgtggcaaaccggttttcgcttgttttatgggtaagacccgtgtt
gcaccggctcggaagctgcttatggatgcagggattccgtgttacgccttcccggaaccc
gccgtacattccatcgaagccatgtatagctattacctctggaagaatcgtcccaagccg
gaatatattgaggttaatcgcgatctggagcaggcgcgggaagtcgtccgtgagcatatg
cgacgtaatcagcctgagatcgtggaatttgaagctcagcaggtgcttaaggcgtacggc
ttgcccacaccgcagacagtgttggctcggtcctctgatgaagctgtggccgctgccgag
gagattggctatcccgtggttctcaagatcgcgtcgccggatatttctcacaagtctgat
gttggtggagtcaaagtgaatttgtggaatgccacagaggtcatgaagacttttaagtcg
ataacggccaaggcccagcgtatgcgtcgtgatgcttatatcgcaggttgtctggtgcag
gaaatggctcctccgggcgttaaggaagtgatcattggctttaagcgggatgaggaattc
ggccctatgctgatgtttggtctgggtggtatttatgttgagatcatgaaagatatttcg
ttcaagcttgcaccgctttcacgacaggactcatttgagattgtgcgtgaaattaagtcg
tacatgttgctcaaggggttgaagggtgagaagcctgtgaacttcacggcactggaagag
attatcatggttatgtcacggttggcgattgatctcccagaggtttgggaagctgagttc
aacccggttcttgttaatcatgagagggccattgttgcggatgtgcggatgactcttcat
ttgaaagataagtag
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