Paenibacillus odorifer: PODO_21535
Help
Entry
PODO_21535 CDS
T03326
Name
(GenBank) polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00900
Terpenoid backbone biosynthesis
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
Module
pod_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PODO_21535
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pod01006
]
PODO_21535
Enzymes [BR:
pod01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PODO_21535
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PODO_21535
2.5.1.29 geranylgeranyl diphosphate synthase
PODO_21535
Prenyltransferases [BR:
pod01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PODO_21535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AIQ75636
LinkDB
All DBs
Position
complement(4789519..4790418)
Genome browser
AA seq
299 aa
AA seq
DB search
MRQPLEDYIASISDLLSQELETILPAAWTVPENLQQAMKYSLMAGGKRLRPLLVIAACES
LGGSREAALPIAAAIEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEASAILAGDALL
THAFYSVVQASRKFGIPADNVLSIVEDLAEMAGPRGMVGGQIADMEGEQGLTDLAQLKYI
HLHKTGDLIIFSLLAGGRIAGATEKQLEALRDFGTSIGLAFQIQDDILDLVGDEGKLGKK
TGSDIKQQKVTYPYFIGLEESRAEVKQLTEAAQNAVLNGGFYDNQRLLEIADYLMARDH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagccgctggaggattacatcgcatcgataagtgatttgctctcacaggagctt
gagactattcttcccgcagcatggacggttccggaaaatttacagcaagcgatgaagtat
tcgctaatggcagggggcaaacgcctccggccgctgcttgtgatcgctgcttgtgaatca
ctgggaggcagccgtgaagcagccttgcctattgctgctgctattgagatggtacatacc
tactcgttgattcatgatgatctgcctgccatggataatgatgattatcggcgcggcaag
ctgacgaatcataaagtctttggtgaagcgtcagctattcttgcgggtgatgcgcttttg
acccatgctttttacagtgtggtacaagcctcccgtaaatttggcatccctgctgataat
gttttatccatagtggaggatctggcggaaatggcgggtccacgcggcatggtcggcggt
cagatagcagatatggaaggcgagcaaggactaacagatcttgcacagctgaagtatatt
catctgcataaaaccggagatttaattatcttttcgttgttagccggcggacgtatcgca
ggggcaacagagaagcagcttgaagctctgcgtgattttggcacaagcatcggactcgct
tttcaaattcaggatgatattcttgatttggttggagatgaaggcaagcttggtaaaaaa
acaggcagcgatatcaaacagcagaaggtaacctacccttattttattgggttagaggaa
tctcgtgctgaggtgaagcagcttacagaagcagctcaaaatgctgtgctgaatggcggt
ttttacgacaaccagcgcctgctggaaattgcagattatttaatggcacgtgatcactaa
DBGET
integrated database retrieval system