Paenibacillus odorifer: PODO_23715
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Entry
PODO_23715 CDS
T03326
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_23715
Enzymes [BR:
pod01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
PODO_23715
Transfer RNA biogenesis [BR:
pod03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PODO_23715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AIQ76015
LinkDB
All DBs
Position
complement(5260194..5261537)
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AA seq
447 aa
AA seq
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MPSVAFYTLGCKVNFYDTEAIWQLFKNEGYEQVDFEGPADVYLINTCTVTNTGDKKSRQM
IRRAVRRNPEAIVAVTGCYAQTSPGEILDIPGVDLVIGNQDRDQIMTHVKNIEASRQPVN
AVRNIMKTREFEEMDVPGFADRTRAFMKIQDGCNNFCTFCIIPWSRGLSRSRDPKSIVTQ
AHQLVEAGYKEFVLTGIHTGGYGDDLDNYRLADLLWDLDKVDGLERVRISSIEASQIDEK
LLEVLNRSSKMCRHLHIPLQAGHNDVLKAMRRKYTTEEYYAKMQLIRQAMPDVGITTDVI
VGFPGETDEMFRAGYDFMKAINYSEMHVFPYSKRTGTPAARMENQIDEEIKNVRVQELID
LSEEMQIAYARKFVGQTLSVIPERAAKGAPGRNIQHGFSDNYLQVFFDGEDSLQGELCQV
KITEAGVNECRGELIGVSQTGLQQAVR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgtagcattttatactttaggttgtaaagtgaatttttatgacaccgaagcc
atctggcagctattcaaaaatgaaggttacgagcaggtcgatttcgagggacctgccgat
gtatatctgattaatacttgtactgtaactaatacaggtgacaaaaaaagccgtcaaatg
attcgtcgtgccgttcgccgcaatccggaggctatcgtggcggttactggctgctatgca
cagacctctcctggtgagattcttgatattcctggtgtcgatcttgttattggtaaccag
gaccgcgatcagatcatgacgcatgtgaagaacattgaagcctcacgtcagccagtcaac
gctgttcgtaatattatgaagacacgtgaattcgaagagatggatgtacctggctttgcg
gatcggacgcgtgcttttatgaagattcaggatggctgcaacaacttctgcacattctgc
atcattccatggtcacgtggactttcccgcagccgtgatcccaaaagcatcgtaacccag
gcgcatcaattagtagaagcagggtataaagaatttgttctcacgggtattcataccggt
ggttacggtgatgatcttgataattaccgtctagccgatttgctgtgggatctagataag
gtggatggactggagcgggtacgtatcagttctatcgaagccagccagatcgatgagaag
ctgctggaggtgctgaaccgttcctctaaaatgtgccgtcatctgcatatcccgctgcaa
gccggacataatgatgtgctgaaagcaatgcgccgtaaatatacgacagaagaatattac
gccaaaatgcagctgatccgtcaggcgatgccggatgtcgggattactacggatgttatc
gttggattcccgggagagaccgatgaaatgttccgtgccggctacgatttcatgaaggct
attaattactctgagatgcatgtattcccttactccaagcggacgggcactccagcagcg
cggatggagaatcagatcgacgaagaaatcaaaaatgtacgcgtgcaggaactgattgat
ctttcagaagaaatgcaaatagcttatgctcgtaaatttgtaggccagacattaagtgtt
attccggaaagagccgcaaaaggggctccgggccgcaatatccagcatgggtttagcgac
aactatttgcaggtgttcttcgatggtgaagattcactccaaggagaactttgtcaggtg
aagataacggaagctggcgtgaacgaatgccgcggcgagttgatcggggttagtcagact
gggcttcagcaggctgttcgttaa
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