Pontibacillus sp. HMF3514: GS400_18310
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Entry
GS400_18310 CDS
T06374
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GS400_18310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pof03021
]
GS400_18310
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_18310
Transcription machinery [BR:
pof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GS400_18310
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GS400_18310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
QHE53851
UniProt:
A0A6P1HM88
LinkDB
All DBs
Position
complement(3613253..3613819)
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AA seq
188 aa
AA seq
DB search
MSFKNYSHDEIAEMSMIEIAHEVLTDEKQALDFNELFDKVASIKGFTKEQKKKWIAQLFT
DLNVDGRFLTIGSNMWGLKRWYPVEQAEEEIQAPVKKKKKKAPAKSKKKKKEEEEESDIE
EEEIEDDLDLDDEELDLDEDGEENSGLDEDFDLSEDDDDYSETEANDESLNEISDEEDDE
EEEEDDNL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgagctttaaaaactatagccacgatgagattgctgaaatgtcaatgattgaaatcgcc
catgaagtgcttacagacgaaaaacaagcgctagatttcaatgaactttttgataaagta
gcaagcattaaaggcttcacaaaagagcaaaagaaaaaatggattgcgcaattgttcaca
gatctaaatgttgatggacgtttcttaacgattggatcaaatatgtggggattaaaacgc
tggtacccagttgagcaagcagaagaagaaatccaagcacctgtaaagaagaaaaagaaa
aaagcaccagccaagagcaagaagaagaagaaggaagaggaagaagagtctgatattgaa
gaagaagaaattgaagacgaccttgaccttgatgatgaagaacttgatctagacgaagat
ggcgaagaaaatagtggcttagatgaagactttgatctttctgaagatgatgatgactat
tctgaaacagaagcaaatgatgaaagtcttaacgaaattagtgatgaagaagacgatgag
gaagaggaagaagacgacaacctataa
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