KEGG   Pseudomonas otitidis: PtoMrB4_08360
Entry
PtoMrB4_08360     CDS       T06890                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
poj  Pseudomonas otitidis
Pathway
poj00740  Riboflavin metabolism
poj01100  Metabolic pathways
poj01110  Biosynthesis of secondary metabolites
poj01240  Biosynthesis of cofactors
poj02024  Quorum sensing
Module
poj_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:poj00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PtoMrB4_08360 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PtoMrB4_08360 (ribD)
Enzymes [BR:poj01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PtoMrB4_08360 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PtoMrB4_08360 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BCA26859
UniProt: A0A679GGN1
LinkDB
Position
889422..890546
AA seq 374 aa
MTASDQAFMARALELARKGLYSTHPNPRVGCVIVRDGQVVGEGWHARAGEPHAEVHALRQ
AGERARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPQVAGRGLLRLMDA
GIAVQSGVLESEARVLNAGFIKRMETGLPFVRVKLAMSLDGRTAMASGESQWITGPAARA
AVQRLRARASVVLTGADTVLTDGARLTVRPDELGLNAELTALAVTRPPLRVLVDGRLRVP
LSAPFYQAGKALVATCAVASARDRFQEEGHELLAVPSSNGHVDLRRLLLELGSRGANEVL
VEAGPRLAGAFARAGLVDEFQIFMAGRLLGSSARPLLDWPLARMTEAPQLKITDVRAVGD
DWRIIAVPLPLVAR
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaccgcatccgaccaggccttcatggcccgtgcgctggaactggctcgcaagggcctc
tattcgacccaccccaatccccgcgtcggctgcgtgatcgtccgtgacggccaggtggtc
ggcgaaggctggcacgcccgcgccggcgagccccacgccgaggtgcacgccctgcgccag
gccggtgagcgcgcccggggggccaccgcctacgtgaccctggagccgtgcagccaccac
gggcggaccccgccctgcgccgatgcgctggtgaacgccggcgtcgcccgggtggtcgcc
gccatgcaggaccccaatccccaggtggccggccgtggcctgctgcgcctgatggacgcc
ggcatcgccgtgcagtccggggtgctggagagcgaggcgcgcgtgctcaatgccggcttc
atcaagcgcatggaaaccgggttgcccttcgtccgcgtcaagctcgccatgagcctggac
ggccgcaccgccatggccagtggcgaaagccagtggatcaccggcccggccgcccgtgcc
gccgtgcagcgcctgcgggcgcgggccagcgtggtgctgaccggtgccgacaccgtgctc
accgacggcgcccgcctgaccgtgcgccccgacgagctgggcctgaacgccgaactgacc
gccctggcggtgacccgtccgccgctgcgcgtgctggtggacggtcgcctgcgggtgccg
ctctccgcgcccttctaccaggccggcaaggccctggtggccacctgcgccgtggcctcg
gcgcgggatcgcttccaggaggagggccacgaactgctggccgtgccgagcagcaacggc
catgtcgacctgcgtcgtctgctgctggaactgggctcgcgcggggccaatgaagtgctg
gtggaggccgggccgcgcctggccggtgccttcgcccgggcgggcctggtggatgaattc
cagatcttcatggccggtcgcctgctcggctccagcgcccgtcccctgctggactggccc
ctggcgcggatgaccgaggcgccgcagctgaagatcaccgacgtgcgtgctgtcggtgac
gactggcgcatcatcgccgtgccgctgcctctggttgctcgatag

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