Pseudomonas otitidis: PtoMrB4_20590
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Entry
PtoMrB4_20590 CDS
T06890
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
poj
Pseudomonas otitidis
Pathway
poj00250
Alanine, aspartate and glutamate metabolism
poj00310
Lysine degradation
poj00350
Tyrosine metabolism
poj00650
Butanoate metabolism
poj00760
Nicotinate and nicotinamide metabolism
poj01100
Metabolic pathways
poj01120
Microbial metabolism in diverse environments
Module
poj_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PtoMrB4_20590 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PtoMrB4_20590 (gabD)
00310 Lysine degradation
PtoMrB4_20590 (gabD)
00350 Tyrosine metabolism
PtoMrB4_20590 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PtoMrB4_20590 (gabD)
Enzymes [BR:
poj01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PtoMrB4_20590 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PtoMrB4_20590 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PtoMrB4_20590 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
BCA28082
UniProt:
A0A679GG44
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All DBs
Position
complement(2246726..2248177)
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AA seq
483 aa
AA seq
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MNPTASPLFRQQAYIDGQWLDAADGARQDIFNPATGSCIGQVPNLGAAEARQAIEAAERA
WPAWRALTAKERSARLKRWHALMIEHTETLAQILTLEQGKPLAEARGEIVYAASFIEWFA
EEAKRIYGDTIPSHKGDARIVVTKEPIGVVAAITPWNFPAAMITRKAGPALAAGCPCIVK
PAPETPFSALALAALAEQAGIPAGVFNVITGDAVAIGGELTASPAVRKLSFTGSTAIGKL
LMAQCAPTLKKVSLELGGNAPFIVFDDADLERAVEGALVAKFRNAGQTCVCVNRFLVQDG
IHDAFVARLAERVAQLKVGSGFDEGVTQGPLINERAVAKVEDHVRDALAQGARLLCGGER
HPLGHGFYPPTVLAEVNTGMKVAHEETFGPLAAVFRFHDEAEAVRLANDTEFGLAAYCYT
RDLGRAWRMSEALEYGMVGINEGLISTEVAPFGGIKASGLGREGSHYGIEDYLEIKYTLM
GGL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaccgcttcccccctcttccgccagcaggcctacatcgacggccagtggctg
gacgccgccgacggcgcgcgacaggacatcttcaaccccgccaccggttcctgcatcggc
caggtgccgaacctcggcgccgcagaggcccggcaggccatcgaggccgccgaacgcgct
tggccggcctggcgcgcgctgaccgccaaggagcgcagcgcacgcctgaagcgctggcat
gcgctgatgatcgagcacaccgagaccctggcgcagatcctcaccctggaacagggcaag
cccctggccgaggcgcgcggcgagatcgtctacgccgccagcttcatcgaatggttcgcc
gaggaggccaagcgcatctacggtgacaccatccccagccacaagggcgatgcacgcatc
gtggtgaccaaggagcccatcggcgtggtcgccgccatcaccccgtggaacttccctgcc
gcgatgatcacccgcaaggccggcccggccctggccgccggctgcccgtgcatcgtcaag
ccggcaccggaaacgcccttctccgccctggccctggcggccctggccgagcaggcgggc
atcccggccggggtattcaacgtcatcaccggcgacgccgtggccatcggcggcgagctg
accgccagcccggccgtgcgcaagctctccttcaccggctccaccgccatcggcaagctg
ctgatggcccagtgcgcgccgaccctgaagaaggtgtccctggagctgggcggcaatgcg
cccttcatcgtcttcgacgacgccgacctggagcgagccgtggaaggcgccctggtggcc
aagttccgcaacgccgggcagacctgcgtgtgcgtcaaccgcttcctggtgcaggacggc
atccacgatgccttcgtcgcccgcctggccgagcgcgtggctcaactgaaggtcggcagc
ggcttcgacgagggcgtcacccagggcccgctgatcaacgagcgcgctgtggccaaggtg
gaagaccacgtgcgcgacgccctcgcccagggcgcccgcctgctctgcggcggcgagcgc
cacccgctgggccacggcttctacccgcccacggtgctggccgaggtcaacaccggcatg
aaggtggcccacgaggaaaccttcggcccgctggcggcggtgttccgcttccatgacgaa
gccgaggccgtgcgcctggccaatgacaccgagttcggcctcgcggcctactgctacacc
cgcgacctgggccgcgcctggcgcatgagcgaggcgctggagtacgggatggtcggcatc
aacgaagggctgatctccaccgaagtcgcgccgttcggcggcatcaaggcctcgggcctg
ggccgcgaaggctcgcactacggcatcgaggactacctggaaatcaaatacaccctcatg
ggcggcctgtga
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