Pseudomonas otitidis: PtoMrB4_28930
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Entry
PtoMrB4_28930 CDS
T06890
Symbol
spdH
Name
(GenBank) spermidine dehydrogenase SpdH
KO
K00316
spermidine dehydrogenase [EC:
1.5.99.6
]
Organism
poj
Pseudomonas otitidis
Pathway
poj00330
Arginine and proline metabolism
poj00410
beta-Alanine metabolism
poj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PtoMrB4_28930 (spdH)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PtoMrB4_28930 (spdH)
Enzymes [BR:
poj01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.6 spermidine dehydrogenase
PtoMrB4_28930 (spdH)
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Gene cluster
GFIT
Motif
Pfam:
NAD_binding_8
DAO
Thi4
FAD_binding_2
Pyr_redox_2
FAD_oxidored
NAD_binding_9
Mqo
GIDA
Motif
Other DBs
NCBI-ProteinID:
BCA28916
UniProt:
A0A679GDF6
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All DBs
Position
3163371..3165233
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AA seq
620 aa
AA seq
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MSITRRDFLNGAALTVGLGLTPLQLLRAAPSGRYYPPALTGLRGSHPGSFDVAHQMGWEK
KVFDTDGLPIEEQYDLVVVGGGISGLSAAWFYRQQNPDARILIVENHDDFGGHAKRNEFQ
AGGRMILGYGGSEAFQSPKHLYSSQVNGLLKQLGVDIDRFETAFDRDFYPGLGLSRGVFF
DKAGFGEDKLVTGDPTPMVADDIAPEKLNARNWRAFINDFPLPEADREALIALHEAPRDY
LAGKSREEKEAHLAKTSYQDFLRKDVGLSEAATRYFLSRTNDFSALSIDAVAAADAYAVG
FPGFAAMDLSPISEEAKAEMEEPYIYHFPDGNASVARLLVRSLIPGVAAGKGMDDIVLAD
FDYARLDLPSNAVRLRLNSTAVSVRNRAGAVDVGYSRGGQLHRVRARHCVLACYNMMIPY
LLRDLPAPQAHALAQNVKFPLVYTKVVIRNWHSFAKLGVHEIYAPSQPYSRVKLDYPVDI
GGYRHPRDPAQPIGLHMVYVPTSPGMGMDARTQARVGRGKLYAMSFEQMETMIREQLQAM
LGPAGFDHEKDILAITVNRWSHGYAYFSNSLFDDEDESEKLMNLARRKLGNVTIANSDAA
WSAYAHAAIDEAWRAVRELG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcacccgccgcgacttcctcaacggcgccgccctgaccgtcggcctcggcctc
accccgctgcagttgctgcgcgcagccccctccgggcgctactacccccctgccctcacc
ggcctgcgcggcagccaccccggctccttcgacgtggcgcaccagatgggctgggagaag
aaggtgttcgacaccgacggcctgcccatcgaggagcagtacgacctggtggtggtcggc
ggcggcatcagcggcctctcggcggcctggttctaccggcagcagaaccccgacgcacgc
atcctcatcgtcgagaaccacgacgacttcggcggccacgccaagcgcaacgaattccag
gccggcggccggatgatcctcggctacggcggcagcgaagccttccagtcgcccaagcac
ctctacagcagccaggtgaacggcctgctcaaacagctgggggtggacatcgaccgtttc
gagaccgccttcgaccgcgacttctaccccggcctcgggctgtcccgcggggtgttcttc
gacaaggccggcttcggtgaagacaagctggtgaccggcgacccgacgccgatggtggcc
gacgacatcgccccggaaaaactcaacgcccgcaactggcgcgccttcatcaacgacttc
ccgctgcccgaggccgaccgcgaggccctcatcgccctgcacgaagcgccccgtgactac
ctggctggcaagagccgcgaggagaaggaagcccacctggccaagaccagctaccaggac
ttcctgcgcaaggacgtcggcctgagcgaagccgccacccgctacttcctcagccgcacc
aacgacttctccgccctcagcatcgacgccgttgccgcagcggatgcctacgccgtgggc
ttccccggcttcgccgcgatggacctctcgcccatcagcgaggaagccaaggccgagatg
gaagagccgtacatctaccacttccccgacggcaacgcctcggtggcgcgcctgctggtg
cgcagcctgatcccgggcgtggccgccggcaagggcatggacgacatcgtcctcgccgac
ttcgactacgcccgccttgacctgccctccaacgccgtgcgcctgcgcctgaacagcacc
gccgtcagcgtgcgcaaccgcgccggcgccgtggacgtgggctacagccgtggcggccag
ctgcaccgcgtgcgcgcccggcactgcgtgctggcctgctacaacatgatgattccctac
ctgctccgcgacctgcccgccccgcaggcccacgccctggcgcagaacgtcaagttcccg
ctggtgtacaccaaggtggtgatccgcaactggcacagcttcgccaagctcggcgtccac
gagatctacgcccccagccagccctacagccgcgtcaagctcgactacccggtggacatc
ggcggctaccgccacccccgcgacccggcccagcccatcggcctgcacatggtctacgtg
cccaccagccccggcatgggcatggacgcccgcacccaggcccgggtcggccgcggcaag
ctctacgccatgagcttcgagcagatggaaacgatgatccgcgagcagctccaggccatg
ctcggcccggccggcttcgaccacgagaaggacatcctcgccatcaccgtcaaccgctgg
tcccacggctacgcctacttctccaacagcctgttcgacgacgaagacgagagcgagaag
ctgatgaacctcgcccgccgcaagctgggcaacgtcaccatcgccaactccgacgcggcc
tggagcgcctacgcccacgccgccatcgacgaagcctggcgcgcggtgcgcgagctgggc
tga
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