Pongo abelii (Sumatran orangutan): 100171727
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Entry
100171727 CDS
T01416
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100171727 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100171727 (POLR1B)
Enzymes [BR:
pon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100171727 (POLR1B)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100171727 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
100171727
NCBI-ProteinID:
NP_001128800
Ensembl:
ENSPPYG00000012168
UniProt:
Q5REE8
LinkDB
All DBs
Position
2A:18670989..18712158
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGSRWRNLPSGPSLKHLTDPSYGIPREQQKAALQELTRAHVESFNYAVHEGLGLAVQA
IPPFEFAFKDERISFTILDAVISPPTVPKGTICKEVSVYPAECRGRRCTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKTRGPGYTHYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFLRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTNVSMNTDNLMRIF
TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPALLCNLGVT
PIDGAPHRSYSECYPVLLDGVMVGWVDKELAPGIADSLRHFKVLREKRIPPWTEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDSSLVFGMKPGDPRILQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMY
YKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDR
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagccggtggcggaacctgcccagcgggcctagcctaaagcacttgact
gacccctcttatggaatcccgcgggaacagcaaaaggcagcgttgcaggagctgacgcgg
gcgcatgtggagtccttcaactacgctgtgcacgagggtctcggcctcgcggtgcaggct
atacctccctttgaatttgctttcaaagatgagcgtatctcttttactattctggatgct
gttatcagtccacctacagttccaaaagggaccatctgcaaagaggtcagcgtttatcca
gcagaatgccgaggccgaaggtgtacctaccgtgggaagttgacagccgatatcagctgg
gcagtgaatggaatctcaaaaggaatcattaagcagtttcttggctatgttcccatcatg
gtgaaatccaagctttgcaacttatataaccttcccccacaagccctcattgagcaccat
gaggaggcagaggaaatggggggctattttataatcaatggcattgaaaaagtcatccga
atgttaattatgcctcggagaaattttcccattgcaatggtaagaccaaaatggaagacc
agagggcctggttatactcattatggagtttcaatgcactgtgtgagggaagaacattcc
gctgtcaatatgaacctccactacttggaaaatggcactgttatgttgaactttatttac
cggaaggaactgttttttcttcctttgggatttgcacttaaggcacttgtcagcttttct
gattatcagatctttcaggagctcatcaaaggaaaagaggatgattctttccttaggaac
tctgtttctcagatgttaaggattgtaatggaagagggttgttcgacacaaaaacaggtc
cttaactacctaggtgaatgcttcagagtaaaactcaatgttcctgactggtatccaaat
gagcaagctgcggagttcctgttcaaccagtgcatctgtatccacttgaaatccaatact
gaaaagttttatatgctttgtctcatgacgcgaaagctctttgctttagccaaaggagag
tgcatggaggacaatcctgatagtttagtgaaccaagaagtcctcacaccgggtcagctc
ttccttatgttcctgaaggaaaaactggaaggttggttagtgtctattaaaatagctttt
gataagaaggctcagaagaccaatgtttccatgaacactgacaatttgatgaggattttt
acaatgggaatagaccttacaaaaccatttgaatacctttttgctactgggaatctgcgt
tctaaaacaggtcttggcctcctacaagattctggactttgtgttgtggctgacaagctg
aacttcatacgctacctctcccatttccgctgcgtgcacagaggggctgattttgccaag
atgaggaccaccacagtacgcaggctgctgccagagtcctggggcttcctttgtcccgtg
cataccccagacggggagccatgtggcctgatgaaccacctaactgccgtatgtgaggtt
gtcacacagtttgtgtatacggcatctattccagctttactgtgcaacttgggggtcact
cccattgatggagctccccaccgatcatacagtgagtgctaccctgtcctgctggacggc
gtcatggttggctgggtggataaggagcttgctccaggcatcgcagattctcttcgtcat
tttaaggtgttgagagagaaaagaattcctccctggacggaagtggtccttatacccatg
acaggaaaaccaagtctgtacccaggattgttcctttttaccactccttgtagactggta
cggcctgtgcagaacttagaattgggcaaagaagagctaattggaactatggaacagatc
ttcatgaatgtcgctatctttgaggatgaggtttttgctggagttaccacacaccaggaa
ctctttccacacagcctgctgagtgtgattgccaacttcatccctttctctgatcacaac
cagagtccacggaacatgtaccagtgccagatgggtaagcaaactatgggctttccactt
ctcacttatcaagaccgatcggataacaaactatatcgtcttcagactcctcagagtccc
ttggtgagaccctccatgtatgattattatgacatggataactatccaattgggaccaat
gccatcgttgctgtgatttcttacactggctatgatatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggctttgcccatggaagtgtctacaagtctgagttcatagac
ctctctgaaaaaattaaacaaggagatagtagcctggtgtttggaatgaaacctggtgac
ccacgcattttgcagaagttagatgacgatggattgccgtttataggagcaaaactgcag
tatggagatccatattacagctacctaaacctcaacactggagaaagttttgtgatgtac
tataagagtaaagaaaattgtgttgtggataacatcaaagtgtgcagtaatgacactggg
agtggaaaattcaagtgtgtttgcatcactatgagagtgcctcggaacccaactatcgga
gataaatttgccagtcgtcatgggcagaagggcattttaagcagattgtggccggctgag
gacatgccttttactgagagtgggatggtcccagacattctgttcaatccccatggtttt
ccatcccgcatgaccattgggatgttaattgagagtatggccgggaagtctgcagctttg
catggtctctgccatgatgctacacccttcatcttctcggaggagaactcggccttagaa
tactttggtgagatgttaaaggctgctggctacaatttctatggcaccgagaggttatat
agtggcatcagtgggctagaactggaagcagacatcttcataggagtggtttattatcag
cgcttacgccatatggtctcagacaaatttcaagtaaggacaactggagcccgagacaga
gtcaccaaccagcctattgggggaagaaatgtccagggtggaatccgttttggggagatg
gaacgggatgcgcttttagctcacggtacatcttttctccttcatgaccgcctcttcaac
tgctcggatcggtcggtagcccatgtgtgtgtgaagtgtggcagtttactctctccactg
ttggagaagccacccccttcttggtctgccatgcgcaacagaaaatacaactgtactctg
tgtaatcgcagtgacactatcgatactgtttctgtgccttatgtttttcggtattttgta
gctgaattagcagctatgaacatcaaagtgaaactggatgttgtttaa
DBGET
integrated database retrieval system
