Polaromonas sp. Pch-P: F7R28_09230
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Entry
F7R28_09230 CDS
T06273
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo00540
Lipopolysaccharide biosynthesis
poo01100
Metabolic pathways
poo01250
Biosynthesis of nucleotide sugars
Module
poo_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
F7R28_09230 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
poo01005
]
F7R28_09230 (rfaD)
Enzymes [BR:
poo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
F7R28_09230 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
poo01005
]
Core region
F7R28_09230 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QGJ18556
UniProt:
A0A5Q3HFJ1
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Position
complement(1952667..1953674)
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AA seq
335 aa
AA seq
DB search
MKIVVTGAAGFIGSNIIKGLNARGIDDIIAVDDLTHGDKFRNLADLQIADYVDADDFYDL
FAEGAYGQVEAVFHEGACSDTMELDGKYMMDNNYTLSCELFHACQDQGTRLIYASSAATY
GGSDTFRESPEFEKPLNVYGYSKLLFDQRLRRELGAKFEGTATQVAGFRYFNVYGPREQH
KGRMASVAFHQFNQFQAEGKVKLFGEYGGYGPGGQMRDFVFIDDVVAVNLWFLDHPEKSG
IFNLGTGKAQPFNDVAIAVVNTLRKGQNAAALSLEDAARGGLIDYIDFPPALVGKYQSYT
QADLGALRAAGCDHAFADVQTGVTAYMQWLNATKG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtagtcaccggcgcggccggcttcatcggcagcaacatcatcaagggtctc
aacgcccgcggcatcgacgacatcatcgccgtcgacgacctgacccacggcgacaaattc
cgcaacctggccgacctgcagattgccgactatgtcgacgccgacgacttctacgacctc
tttgccgaaggcgcttacggccaggtcgaggccgtcttccacgagggtgcctgcagcgac
accatggagcttgacggcaagtacatgatggacaacaactacacgctgtcgtgcgagctg
ttccatgcctgccaggaccagggcacacgcctgatctatgcgtcttccgcggcgacttac
ggcggctcggacactttccgtgaatcccccgagttcgaaaaaccgctgaacgtctacggc
tactccaagctgctgtttgaccagcgcctgcgccgtgaactcggcgccaaatttgaaggc
accgccacgcaggtggccggcttcaggtacttcaatgtctatggcccgcgtgagcagcac
aagggccgcatggccagcgtcgccttccaccagttcaaccagttccaggccgaaggcaag
gtcaagctgtttggcgaatacggcggctacggccccggcggccagatgcgcgacttcgtc
ttcatcgacgatgtggttgccgtgaacctctggttcctcgaccacccagagaagtccggc
atcttcaacctcggcaccggcaaggcgcagcctttcaacgacgtggccatcgccgtcgtg
aacaccttgcgcaagggccagaacgccgcggccctgagcctggaagacgccgcgcgcggc
gggctgatcgactacatcgacttcccgcctgcactggtgggcaaataccagagctacacc
caggccgacctcggcgccttgcgcgctgcgggttgcgaccatgcctttgccgatgtgcaa
acgggtgtgactgcttacatgcagtggttgaacgccaccaagggctga
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