Populus trichocarpa (black cottonwood): 112325061
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Entry
112325061 CDS
T01077
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00270
Cysteine and methionine metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
112325061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
112325061
03032 DNA replication proteins [BR:
pop03032
]
112325061
03036 Chromosome and associated proteins [BR:
pop03036
]
112325061
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pop02048
]
112325061
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
112325061
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112325061
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
112325061
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112325061
Prokaryotic defense system [BR:
pop02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
112325061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
112325061
NCBI-ProteinID:
XP_024446254
LinkDB
All DBs
Position
18:complement(15775183..15784191)
Genome browser
AA seq
1575 aa
AA seq
DB search
MGSSSILDTTTNDPVDNTISSSSSVGMRKNKKGKQKSSVSNVKKEVPEKNTKGKKRNSPD
TNKEEPTGGDGSLKRPKRAAACKDFKEKSVRLHEEKSYVVESKKEQVVDEEILAVRLTQG
QEEGRPNRRLIDFVVHDANGNPQPLEMVEVDDMFISGIIMPHEESLDKEKEVHVRCDGFG
RIEAWDISGYEDGSPVIWLSTEVADYDCIKPAGGYKKFFDHFFQKALACVEVYKKLSRFS
GGNPEFTLDELLAGVVRAMSGNKCFSGAVSIKNFLISQGEFIYHQIIGLDETSTKNDKKF
ADLPVLVALRDESRNHGNVLIAKAANSGGNLVIGPESVDGAVVNQSNQSSTTVEEDEDAK
LARLLQDEEYWQSNMRQKKSRGSVSASNTIYIKINEDEIANDYPLPAFYKHSNEETDEYI
AVASDDVIDHPDDLPRRMLHNWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGSMTEDDG
SGFCLDDGPDQSSSRGLEAQDDMGLPIFLSAIKEWMIEFGSSMIFISLRTDMAWYRLGKP
SKQYASWYKPVLKTVKLARTIITLLKEQSRVSRLSFADVIRKVSEFKKDHHAYISSDLAA
VERYVVVHGQIILQLFAEFPDQKIKKCAFVVGLTRMMEERHHTKWVVNKKAIVQKCHSNL
NPRAAMDTVASGASKRKLMQATTTRLINRIWGEYYSNYSPEDLKEGNDCDVKEEDELEEQ
DENEDDDKEVVVEKTLKPYSVFEHCKSHTSQKEVRWDGNPVRKISSGEDIYKQAIVCGQV
IVVGAAVLVEVDEPDELPAIYFVEYMFETRNGSKMFHGRMMKWGSETVLGNTANDREVFL
TNECMNYKLQDVKQTIILEVRKRPWGHHHRKDNANADRIDREKAEERKKKGLPLEYYCKS
LYWPERGAFFTLPFDTMGLGSGVCHSCNLKISEEDKNISKVNSSQTGFSYKGTEYSVHDF
VYVSPHQFAVESGETETFKGGRNVGLKPYAVCQLLEVVPMETKQSETRSTEVKVQRFFRP
DDISPEKAYCSDIREIYYSEETHLLSVEVIEGKCEVRKKIDIPTCSAPAIFDHTFFCEHM
YDPSNGSLKQLPAHIKSKFSAVSKDGDVASRKRKGKSKEGENDTEDDKQLEASPEYRLAT
LDIFAGCGGLSEGLQQAGVSTTKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAVMER
CGDADDCISTSEAAKMASSLDAKVIDGLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKV
QCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGA
YGVSQSRKRAFIWAASPEEILPEWPEPMHVFAAPELKITLSEKSQYAAVRSTAYGAPFRA
ITVRDTIGDLPDVANGASKTNLEYGNDPISWFQKKIRGDMVVLTDHISKEMNELNLIRCK
NIPKRPGADWRDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSI
TDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDNYQFFGNIQHKHRQIGNAVPPPLAYA
LGRKLKEALDSKRQK
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcatcaatattggatacaacaacaaatgatccagttgataatactatttct
tcttcatcatctgtaggtatgaggaagaacaaaaaagggaaacaaaaatcttcagtgtct
aatgtaaagaaagaagtgccagaaaaaaacacaaaagggaagaagagaaattcccctgat
accaacaaggaagagcctactggtggcgatggttcactaaaaaggcctaagagagctgct
gcatgcaaagatttcaaggagaaatctgtacgattgcatgaagagaagtcttatgttgtt
gaatcaaagaaagaacaagttgtcgatgaagaaattctagctgttcgtttgactcaaggg
caagaagagggtcgcccaaacaggagattgattgattttgttgtgcatgatgcaaatggc
aacccacagcccttggagatggttgaagttgatgatatgtttatctctggcattataatg
cctcacgaggaaagccttgacaaggaaaaagaagtgcatgttaggtgtgatggctttgga
aggatagaagcatgggatatctctggttatgaagatggatccccagtcatttggcttagt
actgaagtggcagattatgactgcattaagcctgctggtggctacaagaagttctttgat
catttcttccagaaggcacttgcttgtgttgaagtctacaaaaaactctcaagattctct
ggaggaaaccctgaattcacccttgatgagttgcttgctggggttgtgcgagcaatgagt
ggaaataagtgtttctctggtgcagtatccatcaagaatttcctcatttctcagggtgaa
tttatttatcaccaaataattggtttggatgagacttccacaaagaatgataagaaattt
gcagacttgcctgttcttgtagccttgagagatgaaagtcgcaatcatggaaatgttctg
atagcaaaagcagcaaattctggtgggaacttggtgattggtccagaatctgtggatggt
gctgttgtgaatcagtctaaccaatccagtaccacagttgaggaagacgaggatgcaaag
ttagcaagattattgcaggatgaagagtattggcagtctaatatgaggcagaagaaaagt
cgtggttcagtttctgcatccaacacaatctacatcaaaattaatgaagatgagattgca
aatgactaccctctccccgcgttttacaaacactctaatgaagaaaccgatgagtatata
gctgttgcaagtgatgatgtaattgaccaccctgatgatctccctagaagaatgcttcat
aactggtcactttataactcagactcaaggttgatttctttggagcttcttccaatgaaa
ccttgtgaagacattgatgtcaccatctttggatcaggaagtatgactgaagatgacgga
agcggattctgtcttgatgatggtcctgatcagtcttcttcaaggggtttggaggctcag
gatgacatgggtttgccgatatttttgagtgcgataaaggagtggatgattgagtttgga
tcatcaatgatttttatatcattacgcacggacatggcctggtatagacttggaaagcca
tcaaaacaatatgcttcctggtataagccagtcctaaaaacagttaagcttgcaagaacc
atcattacattgttgaaggagcaaagtcgagtatcacggctttcttttgcagatgtaatc
cggaaagtgtctgagttcaagaaggatcatcatgcttatatttcttctgatctagcagct
gttgagaggtacgtggtagtgcatggacagataatactacagctttttgctgagtttcca
gatcagaagatcaagaaatgtgcttttgtggtcggtttgactcgtatgatggaggagagg
caccatactaaatgggtagtgaacaaaaaagcaattgtgcaaaagtgtcattccaatttg
aatcctcgggctgcaatggatactgttgcttctggagcgtccaagaggaagcttatgcag
gcaacaacaacaagactgatcaacagaatatggggggaatattattcaaactattctcca
gaggatttgaaagagggaaatgattgtgatgtaaaagaagaagatgaacttgaggaacag
gatgaaaatgaagatgatgataaagaggtggtggtagagaaaacactaaaaccttattca
gtgtttgaacattgtaaatcccatacttcacaaaaagaggtaagatgggatgggaatcct
gtaagaaaaatatcttctggagaagacatttacaagcaagccattgtttgtggacaggtc
attgtggtgggggctgctgtcttagtggaggttgatgaaccagatgaacttcctgccatt
tattttgtggagtacatgtttgaaacaagaaatggaagtaaaatgtttcacgggagaatg
atgaagtggggatctgagacagttcttggtaacactgccaatgatagagaggttttctta
acaaatgaatgcatgaattataaactacaggatgttaagcaaacaataattctggaagtt
cgaaaaaggccttggggacatcatcacaggaaagataatgccaatgctgatagaattgat
agggaaaaggcagaagagaggaaaaagaaaggattgccactagaatattactgtaaaagc
ttgtactggccagaaaggggtgctttcttcactcttccatttgatactatgggtcttggc
tctggtgtctgccactcttgtaacttaaaaatatctgaagaagacaagaatatttccaaa
gtgaattcttctcaaacaggattttcatacaagggaactgagtactcagtccatgatttt
gtctatgtgagccctcatcaatttgccgtggaaagtggggagactgaaacttttaagggt
ggaaggaatgttggattgaagccttatgctgtgtgccagttattggaagttgttccaatg
gaaacaaaacaatctgaaacaagatccactgaggtcaaagttcaaagatttttcagacca
gatgatatttcacctgaaaaggcatattgttctgatattcgtgagatatattatagtgaa
gaaacacatcttttatctgttgaggtgattgaagggaaatgtgaagtcagaaagaaaatt
gatattcccacatgcagtgctcctgcaatctttgatcataccttcttctgcgagcacatg
tatgatccttccaatgggtccctcaagcagctaccagctcatatcaaatcaaagttttca
gctgtgagtaaagatggtgatgttgcaagtagaaagagaaagggaaagtctaaagaagga
gaaaatgatacagaagatgacaaacaattggaagcatctccagagtaccgtttggccact
ttggatatttttgctggttgtggtggcttgtctgagggattgcagcaagctggtgtctca
acaaccaagtgggctattgaatatgaagagcctgctggggaagcatttaaactcaatcat
gcagaatcattaatgtttattaataattgcaatgtgatcctcagggctgtgatggagagg
tgtggagatgcagatgactgtatttctacttctgaggctgctaaaatggcttcatcactt
gatgcaaaggtgatcgatggtttgccattgccagggcaggtggatttcatcaatggaggg
cctccatgtcagggcttctctggaatgaataggtttaatcagagcacttggagtaaagtt
caatgtgagatgatcttagcattcttatcctttgctgattacttccgcccaaagtatttc
ctcttagagaatgtgaggaactttgtatctttcaataaaggacagactttccgtttaact
attgcttctcttcttcagatgggttatcaggtgagatttggaattttggaggccggagca
tatggagtttctcagtcacgcaaacgtgcctttatatgggcagcctcccctgaggagata
ctcccagaatggccagagccaatgcatgtttttgctgccccagagttaaaaataacattg
tctgagaagtcacaatatgctgctgttaggagtactgcttatggagcccctttccgtgca
ataactgtcagagatacaattggtgatctcccagatgtggcgaatggtgcttctaagaca
aatttggagtatggaaatgatcctatctcttggtttcaaaagaaaattcgaggcgacatg
gttgtcttgactgaccatatatcaaaagaaatgaatgagctgaatcttattagatgcaag
aatatcccaaagcggccaggtgctgattggcgtgatctcccagatgaaaaggtcaaattg
tctactgggcaaatggttgatttgataccatggtgccttccaaacacagctaaacgacat
aatcagtggaaggggctatttggaagattggattgggaagggaacttcccaacatcaata
acagatccccagccaatgggtaaggtggggatgtgctttcaccctgagcaggacaggatt
cttactgttcgtgaatgtgcacgatctcaaggattcccagataactatcagtttttcggt
aacattcaacacaagcatcggcaaattggaaatgctgttcctcctcctctagcatatgcg
ttgggaaggaaacttaaggaagcactggatagtaagaggcagaaatag
DBGET
integrated database retrieval system
