Populus trichocarpa (black cottonwood): 18094769
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Entry
18094769 CDS
T01077
Name
(RefSeq) probable CoA ligase CCL8 isoform X1
KO
K18660
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00061
Fatty acid biosynthesis
pop00280
Valine, leucine and isoleucine degradation
pop01100
Metabolic pathways
pop01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
18094769
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
18094769
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
18094769
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18094769
NCBI-ProteinID:
XP_052301737
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Position
1:16448228..16461354
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AA seq
579 aa
AA seq
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MILFSLFYWMTGVIIALMDINCARQLCSLKNPASSHPGTLMEVVKKVYRQGTAAADSIAI
RAEHKSYSYKQLISSAWEISDLLCNSGLETADGVGGCKHLGGARIGIVAKPSAEFVAGIL
ATWFSGGVAVPLALSYPETELLHVMNDAEISMVLSTEDHQELMQNVADKCAAQFSLIPSV
HRISSHESVHDHSQVEEIALEKGDDPALIIYTSGTTGKPKGAVHTHKSITAQVQTLAEAW
EYSSTDQFLNCLPLHHVHGFFNSLFAPIYAGSTVEFMPKFSVRGIWQRWRESYPPNGSKA
DDAITVFTGVPTIYSRLIQGYGAMDSDQQAASASAARQLRLMMSGSSALPLPVMQEWEAI
TGHRLLERYGMTEFVMAISNPLRGVRKAGTVGKPFPGVQVKIAEDQNENDTTGVGELCIR
SPSMFKEYWKLPQVTEDSFTDDGFFRTGDAGKIDEDGYYVILGRTSADIMKVGGYKLSAL
EIESALLEHPVVAECCVLGLPDKTYGDAVCAIIVPEDAVKRKQEESSKPAISLEELREWA
KDKLAPYKLPTRLFLWESLPRNAMGKVNKKELKKVLAAE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatactgtttagtttgttttattggatgactggtgtgatcattgctttgatggatatc
aattgtgcccgtcaattatgttctctcaagaatcctgcatcgtcgcatcccggtacgctt
atggaggtcgtcaagaaagtttataggcaagggactgcagctgctgatagcattgctatc
agagctgaacataaaagttacagttacaaacaactcatctcatctgcgtgggagatatcc
gacctgttatgtaacagtggcttagaaaccgctgatggtgtaggaggatgtaaacatctt
ggtggagctcgaatcggaatcgtggctaaaccttcagcagagtttgttgctgggatacta
gcaacttggtttagtggaggtgttgcagttccactagcactcagctacccagagactgag
ctcttacatgtgatgaatgatgctgagatatctatggtacttagcactgaagatcatcag
gagttgatgcaaaatgttgctgataaatgtgctgctcaattctctctcattccgtctgtt
cacagaatttcttcacatgaaagtgtacatgatcattcacaagttgaagaaatagcttta
gaaaaaggtgacgatccagcattaattatctacacaagtggaactacagggaaacctaaa
ggcgcagttcacacacacaaaagcatcactgcacaggttcaaactttggcagaagcttgg
gagtactcatccactgatcaatttctcaattgtttaccgctacatcatgttcatggattt
ttcaattctctatttgcccctatctatgcaggctccacggttgagtttatgccaaaattt
agtgtgaggggaatctggcaaagatggcgtgaatcttatcctcctaatgggagtaaggct
gatgatgctataacggtgttcactggggttccaacaatatactctcgactgattcaaggt
tatggagcaatggactcagatcaacaggcagcttctgcctctgctgcaagacagttgcgg
ctgatgatgtctggctcctctgctctcccgcttcctgtcatgcaagaatgggaagccatc
actggccatcgccttttggaaagatatggcatgactgagtttgtcatggcaatatcaaat
cccttaagaggtgtgcggaaggcagggactgtgggtaaaccatttcctggggtgcaggtc
aaaattgcagaagatcagaatgaaaatgatacaacaggcgtgggtgagctctgcatcaga
agtccttccatgtttaaggaatattggaaacttcctcaggtaactgaggattcatttact
gatgatggcttcttcaggactggggatgctggtaaaatagatgaagatggttactacgtc
attttgggacgtacaagtgcagatatcatgaaagttgggggatacaaattatctgcatta
gaaattgaatcggcacttttggagcacccagttgttgcagaatgttgcgttttgggtttg
cctgacaaaacctatggagatgctgtgtgtgctataattgtgccagaggacgcagtaaag
agaaaacaagaggagtcatcaaagcctgctataagcttggaagaactacgcgagtgggct
aaagacaaacttgcaccatacaagctacctactcgattgtttctgtgggagtcactgcct
cgtaatgctatgggaaaggtaaacaaaaaggagttgaagaaagttcttgcggctgaataa
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