KEGG   Populus trichocarpa (black cottonwood): 18095483
Entry
18095483          CDS       T01077                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    18095483
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pop01009]
    18095483
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    18095483
Enzymes [BR:pop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     18095483
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     18095483
Protein phosphatases and associated proteins [BR:pop01009]
 HAD phosphatases
  Other HAD phosphatases
   18095483
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     18095483
SSDB
Motif
Pfam: PNK3P zf-PARP
Other DBs
NCBI-GeneID: 18095483
NCBI-ProteinID: XP_024458545
LinkDB
Position
1:41294199..41298693
AA seq 374 aa
MLAHYCTALTSNSKNSCLFFFRITKHSSLCSTLQNPKRAMPPTSKARIIAEYAKSSRSSC
KTCSKAISAKALRLGLVSRDSRGFDMTKWHHLGCFSDKIDSTEHIGGFDSLQSCDQEALK
KLAEQVSNGDQDVEISRKSSKRTDEDAEESELEKINTKKTKLSIANEEASLDIAFSLSDV
RDNYKDATLLPKWKAFQTIIFLERDDGLRDSNKIAAFDFDGCLAKTSVKRVGADAWSIMF
PSIPDKLLSLYNDGFKLVIFTNESNIDRWKNKRQVAVDSKIGRLNNFIKHVKVPIQVFIA
CGFDGKVEDPFRKPKPGMWQIMEKHFNSGISIDMDQSFYVGDAAGRPNDHSDADIKFAKV
IGLKFLVPEDYFGV
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgctcgcccattactgtacagctctcacctccaacagcaaaaactcttgtcttttcttt
ttcagaattacaaaacactctagtctttgttccactctccaaaaccccaaaagagcaatg
cctcctacttcaaaagccagaatcatcgccgagtacgcgaaatcgagcaggtcatcgtgc
aagacatgctcgaaagcaatatctgctaaggccctcaggttgggtttggtcagtagagac
tcaagagggtttgatatgaccaaatggcatcacttgggttgcttctctgacaagattgac
tctaccgagcacattggagggtttgattctctccagagttgtgatcaggaagccctgaag
aaattggcggaacaggtttcaaatggagatcaagatgttgaaataagccggaaaagttcc
aagagaacagatgaagatgcggaagaaagtgaactggagaaaataaatacgaagaaaact
aagttgtcaatagctaatgaggaagccagcctggacatagccttttcactctccgatgtt
agggacaattataaggacgctacattattacctaaatggaaggcatttcagacaattata
tttcttgaacgggatgatggtctccgtgattcgaataaaattgctgcatttgattttgat
ggctgtctcgcaaaaacatctgtcaagagagtaggtgcagatgcttggtccatcatgttc
ccctcaataccagacaagctgctgagcttatataatgatggcttcaagctggttatattc
acaaatgaatccaatattgatcgctggaagaacaaaaggcaggtagctgtggactcaaaa
attggacgcctaaacaacttcatcaagcatgtcaaggttccaatccaggtttttatagct
tgtgggtttgatggtaaagtagaagatcccttccgcaaacctaaacctggaatgtggcag
attatggagaaacactttaactctggcatctccattgatatggatcaatccttttatgtt
ggtgatgcagcagggagacccaatgatcatagcgatgctgacataaaatttgcaaaggtt
attggattgaaattccttgtcccagaggactactttggtgtctaa

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