Populus trichocarpa (black cottonwood): 18096754
Help
Entry
18096754 CDS
T01077
Name
(RefSeq) protein HOTHEAD
KO
K15403
fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00073
Cutin, suberine and wax biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
18096754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
Pyr_redox_2
FAD_binding_2
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
18096754
NCBI-ProteinID:
XP_024452756
LinkDB
All DBs
Position
3:4376909..4382210
Genome browser
AA seq
591 aa
AA seq
DB search
MASVCALLNQLFLFLLLWLYTLSSSQAVHHQYNSEFRYPFIKKASSFSSSLSSSGRGDHT
YDYIVVGGGTAGCPLAATLSQKFNVLLLERGGMPFGNANISLLQNFHITLTDTSSTSASQ
YFISTDGVLNSRARVLGGGTCINAGFYTRASTRFINKVGWDLKLVNKSYSWVEKQIVHRP
KVAPWQVVVRDSLLDLGVAPFNGFTYDHIYGTKFGGTIFDRFGRRHTAAELLASADPHKL
TVLVHATVQKVLFDTSGKRPKAAGVLFRDENGNQHQAFLSNSLSEVILSCGAIGTPQMLL
LSGVGPKAELKEMKISVVLNNKFVGQGMADNPLNSVFVPSKKPVKQSLIQTVGITKMGVY
IEASSGFGQSKDSIQCHHGIVSAEIGQLSTIPPKQRTPEAIQAYIRRKKDIPHEAFRGGF
ILEKISNPISTGKLKLINTNVEDNPSVTFNYFKHPHDLQRCVDGIRMATKMVQSEHFTNF
TQCDKQTTDKILNMSVSANVNLIPKHTNDTKSLEQFCKDTVLSIWHYHGGCHVGKVVDRE
HKVLAVHRLRIVDGSVFDESPGTNPQATILMMGRYMGLKILRDRLGKAAGV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtttgcgcactactgaaccagctctttctcttcctccttctatggctttat
actctctcttcttctcaagctgtgcaccaccagtacaactctgaatttagatacccattt
atcaagaaagcaagctcattctcatcatccttgtcatcaagtggccggggagatcataca
tatgactatatagttgtgggaggtggcacagctgggtgtcctttagccgccacactctct
cagaaattcaatgttttattgcttgaaagaggtggaatgccttttggcaatgcaaatatc
tccttattacagaacttccatattacccttactgatacttcatcaacttctgcttcccaa
tacttcatttctactgatggagtcctcaattctagggctagagttttgggtggtggtact
tgcatcaatgctgggttctacactagagcaagcacaaggtttataaacaaagttggttgg
gatttgaagttggtgaacaagtcatactcctgggttgagaagcagattgttcacaggcct
aaggttgcaccgtggcaggttgttgtaagggacagtcttttggatcttggagttgcacct
ttcaatggattcacttatgatcacatttatggaaccaagtttggtggtaccatttttgac
cgattcggtcgtcggcacacggctgccgaactacttgcttctgctgatcctcataagctc
actgtgttggtgcacgccacagtccaaaaggttttatttgacacatcaggaaagcgacca
aaagcagctggagtcctattcagagatgaaaatggaaaccagcatcaagcatttctatca
aacagcctgagtgaagtaatattgtcatgtggagccattggcacccctcagatgctattg
ctcagtggtgttggcccaaaagctgaacttaaggagatgaaaatttcagtggtcctcaac
aataagtttgttgggcaaggcatggctgataaccccttgaactcagttttcgttccttct
aaaaaaccagtaaagcagtccctcattcaaactgtagggattaccaagatgggtgtgtac
attgaagctagcagtggatttgggcagtccaaggacagcatacaatgtcaccatggaata
gtatctgcagagatagggcaactatcaaccatacctccaaagcaaagaacacctgaggcc
atccaagcatacattagacgaaagaaggacataccacatgaggcattcagaggaggcttt
atccttgaaaagatttccaaccccatttccactggcaagctcaaattgatcaacacaaat
gttgaagataacccttctgtcaccttcaactactttaaacatccacatgatttacaacgt
tgtgttgatggtattcgcatggctacaaagatggtgcaatcagaacactttacaaatttt
acgcaatgtgacaagcagaccacagacaagattcttaacatgagtgtcagtgctaatgtt
aaccttatacctaagcataccaatgacaccaagtccctagagcagttctgcaaagacacc
gtactctcaatttggcactatcatggtgggtgtcatgttggcaaggttgtggaccgtgag
cacaaagttcttgctgtgcacaggcttcgcattgtagatggatcagtatttgatgaatct
cctgggactaatcctcaagccaccatcctgatgatgggcaggtatatgggactgaaaatc
ttgagagacagactaggaaaagcagctggtgtttag
DBGET
integrated database retrieval system