Populus trichocarpa (black cottonwood): 18099496
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Entry
18099496 CDS
T01077
Name
(RefSeq) ribulose bisphosphate carboxylase small subunit, chloroplastic
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00630
Glyoxylate and dicarboxylate metabolism
pop00710
Carbon fixation in photosynthetic organisms
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Module
pop_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pop_M00532
Photorespiration
pop_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
18099496
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
18099496
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
18099496
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Motif
Pfam:
RuBisCO_small
RbcS
CSS_CxxC
Motif
Other DBs
NCBI-GeneID:
18099496
NCBI-ProteinID:
XP_006383456
UniProt:
A9PHQ1
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Position
17:12218929..12220394
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AA seq
181 aa
AA seq
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MASSVISSAAVATVNRTPAQANMVAPFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQ
VWPPTGLKKFETLSYLPDLTTEQLAQEIEYLLRNKWVPCLEFELEKGWVYREHHQSPGYY
DGRYWTMWKLPMFGCTEASQVLIELEEAKKAYPNSFIRIIGFDNTRQVQCISFIASKPKG
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctgtgatttcatcggcggccgttgccacagttaaccgcacccctgcacag
gccaacatggttgcaccattcaacggcctcaagtctacctcagctttcccggtcaccaga
aaggctaacaatgacattacttccattgcaagcaatggcggaagagttcaatgcatgcag
gtgtggcctccaactggattgaagaagttcgagactctttcttaccttccagatctcact
actgagcaattggcccaggaaattgagtaccttcttcgcaacaagtgggttccttgcttg
gaattcgagttggagaaaggttgggtctaccgcgagcaccaccagtccccagggtactat
gatggacgctactggactatgtggaaactacccatgtttggatgcactgaggcatctcag
gtgctgattgagctcgaggaggcgaagaaagcttaccctaactcctttatccgtatcatt
ggattcgacaacactcgtcaagtgcagtgcatcagttttatcgcctccaagccgaagggt
gtctag
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