Populus trichocarpa (black cottonwood): 18100636
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Entry
18100636 CDS
T01077
Name
(RefSeq) phosphatidate phosphatase PAH1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00561
Glycerolipid metabolism
pop00564
Glycerophospholipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
18100636
00564 Glycerophospholipid metabolism
18100636
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18100636
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
18100636
Protein phosphatases and associated proteins [BR:
pop01009
]
HAD phosphatases
Other HAD phosphatases
18100636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
Motif
Other DBs
NCBI-GeneID:
18100636
NCBI-ProteinID:
XP_006381986
UniProt:
U5G8B3
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All DBs
Position
6:complement(22119891..22126882)
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AA seq
901 aa
AA seq
DB search
MNVVGKVGSLISQGVNSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKRA
EKIVRINVNGVEANFHMYLDNSGEAYFIKEVEPGKGSEANGVIKDSDSMAMSNEDVSVGF
SDVVDNNVVGISRLEHSVSDSRVIQLREEDDSSGAARLQRAESDGDRRYYDLEDEQPSLD
DSVELSEYGSNRYDGLDGEHPAVSQRSHSEVILVSVDGHVLTAPVLESEQNTENVQLCTP
QFHLGRGDDTEEFNSGDDSWAANYINTLNASTSNVASDNAYSASNGDNICQPEVCEGDEE
HACQGQEIQDISRSEGDLLAQSDSDTSVRINREDIFKSCSALPEWAKQAGIVDLEEMDSS
LEVQKDSREESPCSPPAADQTTDGDFGEFTDNGCNANGLHGSPTLLVELEATDKNASRTE
HLGADSTCISVSIVNSSDEKGEESDHISTVCDGSNSSLHRPVPKDESSKSETVELQRAIS
IEEMQTCSSKGFEISLCGKELHAGMGLDAAAEVFAAHCVSAAEFKNSATSIIKNENLIIR
YGQKYFPWEKAAPIVLGMVAFGLDLPAEPKDAIPVELDETVAQRDDDAVISSASSSRIWR
LWPIPFRRVQISRESSSEELFVDSESGVQNTNVESTSASHGGSVSPHKQFIRTNLPTSEQ
IASLNLKDGQNMITFSFSTRVLGTQQVDCHIYLWKWNARIVISDVDGTITKSDVLGQFMP
LVGKDWTQSGVAKLFCAIKENGYQLLFLSARAIVQAYLTRSFLFNVKQDGKTLPNGPVVI
SPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPTDCNPFYAGFGNRDTDELSYRKIGIP
KGKIFIINPKGEVAISHRIDVKSYTSLHTLVDDMFPPTSLAEQEDYNSWNFWKVPLPDIE
I
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgttgggaaagtgggtagtttaatttcgcaaggtgtaaactcggtggcaacc
ccttttcatcccttcggtggggctgttgatgttattgtggtacaacagcaagacgggaca
tttcgaagtaccccatggtatgttcgatttggcaaatttcagggtgttcttaagagagct
gagaagattgtccgcataaacgtcaatggtgttgaagctaattttcacatgtatcttgat
aattctggagaagcttatttcataaaggaggttgagcctggtaaaggaagtgaggcaaat
ggggtaataaaggattctgatagcatggcaatgtcgaatgaagatgtcagtgttggtttt
agtgatgttgttgataataacgttgttggaatttctaggcttgagcatagtgtttccgat
tctagggtgattcagctgcgagaggaagatgattcatcgggtgcagcacgacttcagagg
gcagaatctgatggtgaccggaggtattatgatcttgaagatgagcaaccctctctggat
gattcagttgagttatcagagtatggttctaacagatatgacggtttggatggcgagcat
cctgcagtttcacaacgttcacattcagaagtgatcctggtgagtgtggatggtcatgtt
ctgacagcccctgtattggaatcagaacaaaataccgagaatgtgcaattatgcacccct
cagttccatctgggccgaggtgatgacaccgaggagtttaattcaggtgatgattcatgg
gctgctaattacatcaatacgctgaatgcatctacatcaaatgttgcatctgataatgct
tacagtgcaagtaatggtgataacatttgccaaccagaggtttgtgagggtgatgaggaa
catgcatgtcaaggtcaagaaattcaggacatttctagatcagaaggagatcttctggca
caaagcgattcagatacatctgttaggataaacagggaagatattttcaaaagctgctcg
gcgttaccagaatgggccaaacaggctggaattgttgatcttgaggaaatggattcttca
cttgaggtgcaaaaagattcacgtgaggagtctccttgtagtcctccagcagctgatcaa
actactgatggggattttggtgaattcacagacaatggctgtaatgctaatggacttcat
gggtcacctactttgctggttgaactcgaagcaacagataaaaatgcttcgaggacagaa
catttaggtgctgacagcacttgtatttctgttagcattgttaacagttcagatgagaag
ggtgaagagtctgatcacatatctacagtgtgtgatgggtcaaatagcagtttgcataga
cctgttcccaaagatgagtcaagtaaaagcgagactgtggaactgcagagagcaatctcc
attgaagagatgcaaacttgttcaagcaaagggtttgagatctccctctgtgggaaggaa
ctccatgcaggtatgggcttggacgctgctgctgaagtgtttgcagcacattgtgtatct
gctgcggaatttaaaaattctgcaacgtcaattatcaagaatgaaaacttaataatcaga
tatggacaaaagtacttcccgtgggaaaaggctgctcctattgtgcttggaatggtagca
tttggtttggatttacctgctgagcccaaagatgccattcctgtggaactggatgaaaca
gttgcacaaagggatgatgatgctgtgattagttccgcatcatctagccgcatatggagg
ctttggcctattccatttagaagggtccagataagcagagaatcatcaagtgaagagtta
tttgttgattctgaatctggagtgcaaaacacaaatgttgaatcaacttcagcatcccac
ggtggttctgtgtctcctcacaagcagtttataaggacaaatcttccaactagtgagcag
atagcatcattgaatctgaaagatggtcaaaatatgataactttcagtttctcaactagg
gttctgggtacacaacaggtcgattgtcatatctacttgtggaagtggaatgcaagaatt
gtaatttcagatgtggatggaacaattaccaagtctgatgttttgggtcagttcatgccc
ttggttggaaaggactggacacaatctggagtagctaaacttttttgtgccattaaggag
aatggatatcagctattgtttctgagtgcacgtgcaattgttcaggcatatttaaccaga
agttttcttttcaacgtaaagcaggatggaaaaaccctaccaaatggacctgttgttatt
tcacctgatggattgtttccctcattataccgagaagtaataagaagagctcctcatgag
ttcaagattgcgtgcttagaggatattaaaagactctttcctactgattgcaacccattc
tatgcgggcttcggaaatagagataccgatgagcttagttaccgaaaaattgggatccct
aagggcaaaatatttattataaacccaaagggtgaggtggccattagtcatcgcatcgat
gtgaaatcctacacatctttacacacgctggtcgatgatatgttcccccctacatcgtta
gccgagcaggaagattataactcatggaatttttggaaagtgccactgccagatattgag
atttag
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