Populus trichocarpa (black cottonwood): 18103637
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Entry
18103637 CDS
T01077
Name
(RefSeq) glutamate synthase 1 [NADH], chloroplastic isoform X1
KO
K00264
glutamate synthase (NADH) [EC:
1.4.1.14
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00250
Alanine, aspartate and glutamate metabolism
pop00910
Nitrogen metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
18103637
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
18103637
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.14 glutamate synthase (NADH)
18103637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
Pyr_redox_2
Fer4_20
NAD_binding_8
Pyr_redox_3
Amino_oxidase
DAO
Pyr_redox
FAD_oxidored
HI0933_like
FMO-like
Thi4
FAD_binding_3
FAD_binding_2
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
18103637
NCBI-ProteinID:
XP_024438270
LinkDB
All DBs
Position
12:complement(1310791..1321912)
Genome browser
AA seq
2228 aa
AA seq
DB search
MSAAASSSSAILQPKSVKSSISSLNKSSYCVFSPSLNVATAASISRRRGRATRCVSARNS
AVVERKSFLGSKVRGSPSERLHFWLSEGPGREPKLRVVVRSALSGVPEKPLGLYDPSFDK
DSCGVGFVAELSGENSRKTVNDALEMSVRMAHRGACGCETNTGDGAGILVALPHDYYKEV
AKDIGFELPPSGEYAVGMFFLPTSDNRREESKNVFTKVAESLGHTVLGWRPVPTDNSALG
NAALQTEPVIEQVFLTATPRSKADFEKQMYILRRVSMVAITAALNLQYGGVKDFYICSLS
SRTVVYKGQLKPDQLKAYYYADLGNETFTSYMAMVHSRFSTNTFPSWDRAQPMRVLGHNG
EINTLRGNVNWMKAREGLLKCKELGLSKNEMKKILPIVDASSSDSGAFDGVLELLIRSGR
TLPEAVMMMIPEAWQNDKNMDPQRRALYEYSSALMEPWDGPALISFTDGHYLGATLDRNG
LRPGRFYVTRSGRVIMASEVGVVDIPPEDVLRKGRLNPGMMLLVDFEKHTVVDDEALKQQ
YSLARPYGEWLKRQKIELSDIVNSVQESDKVAPAISGVVAASDDDDSMVHMGIHGLLAPL
KSFGYTVEALEMLMLPMAKDGTEPLGSMGNDAPLAVMSNREKLTFEYFKQMFAQVTNPPI
DPIREKIVTSMECMIGPEGDLTETTEEQCRRLSLKGPLLSIGEMEAIKKMNYNGWRSKVL
DITYSIKRGRKGLEETLDRICTEAHEAIKEGYTVLVLSDRAFSSKRVAVSSLLAVGAVHQ
YLVKKLERTQVGLIVESAEPREVHHFCTLVGFGADAICPYLAIDAIWRLQVDGKIPPKST
GELHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEGLGLSSEVIDKCFAGTP
SRVEGATFEMLAHDSLRLHELAFPSRALPPGSAEAVALPNPGDYHWRKGGEIHLNDPLAI
AKLQEAARGNSVAAYKEYSKRIQELNKACNLRGLLKFKVADVKVSLDEVEPASEIVKRFC
TGAMSYGSISLEAHTTLAQAMNKIGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVAS
GRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHH
DIYSIEDLAQLIHDLKNANPSARISVKLVSEAGVGVIASGVVKGHADHVLISGHDGGTGA
SRWTGIKSAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGF
STAPLITLGCIMMRKCHKNTCPVGIATQDPVLRDKFAGEPEHVINFFFMLAEELREIMAQ
LGFRTMNEMVGRSDMLEVDKEVVKSNEKLENIDLSSLLRPAADIRPGAAQYCVQKQDHGL
DMALDQKLIKLSEAALEKSLPVYIETPIRNVNRAVGTMLSHEVTKRYHLAGLPADTIHIK
LKGSAGQSLGAFLCPGIMLELEGDGNDYVGKGLSGGKIVVYPPKGSLFDPKENIIIGNVA
LYGATGGEAYLNGMAAERFCVRNSGARAVVEGIGDHGCEYMTGGTIVVLGKTGRNFAAGM
SGGVAYVLDLDGKFKSRCNLELVDLDKVEEEEDIMTLKMMIQQHQRHTNSLLAREVLADF
DNLLPKFIKVFPRDYKRVLANMKEESASKEAAELAAKEAEEKNEAELREKDAFEELKKMA
AASLNGKSNQVVEDEPLKRPTRVNNAVKHRGFIAYEREGVQYRDPNVRMNDWKEVMESSK
PGPLLNTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVHQNRWREALDRLLETNNFPE
FTGRVCPAPCEGSCVLGIIDDPVSIKNIECSIIDKAFEEGWMVPRPPLKRTGKRVAIVGS
GPSGLAAADQLNKRGHLVTVYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMAKEGINF
VVNANVGIDPLYSLDQLRQENDAIVLAVGATKPRDLPVPGREMSGVHFAMEFLHKNTKSL
LDSNLQDGNYISAKGKKVVVIGGGDTGTDCMGTSIRHGCSGVVNLELLPEPPQTRAPGNP
WPQWPKVFRVDYGHQEAASKFGKDPRSYEVLTKRFIGDEDGSVKGLEVVRVHWEKDASGK
FQYKEVEGSEEIIEADLVLLAMGFLGPEPNVAKKLGLEQDNRSNFKAEYGRFSTNVEGIF
AAGDCRRGQSLVVWAISEGRQAASQVDKYLMKEEDVTISTDNTQDELVKKHEDLTKRHQD
SSKHTVMT
NT seq
6687 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgctgcttcgagttcgagcgctatccttcaaccaaaatcggtgaaatcttca
atttcctcgcttaacaaatcatcatactgtgttttttctccttcgcttaatgttgccacg
gcagcatctatttctcgacggagagggagggcaactcgatgtgtttcggcgaggaactcg
gcggtagttgagagaaaatcgtttttaggaagtaaagtgcgcggctctccatcggagagg
ttgcatttttggctgtcggaaggaccgggcagagagccgaaactacgagttgtggtccgc
tctgcattgtctggtgtgccggagaagccgcttgggctttatgacccgtcgtttgataag
gattcgtgcggggttgggtttgttgctgagttgtcaggggaaaacagtcgcaaaacggtg
aacgatgctctggagatgtcggtgaggatggcacatagaggagcttgcggatgcgaaacc
aatactggtgatggtgctgggattcttgtggctcttcctcatgactactacaaggaggtg
gctaaggatattgggttcgaactgcctccttcaggggaatatgcagtgggcatgttcttt
ctgcccacatctgataatcgcagggaagaaagcaagaatgtattcaccaaggttgcggag
tctcttgggcatacagtacttggatggcgaccagtgccaacagataattctgcattggga
aatgctgctttgcagaccgaacctgtcatcgagcaagtgtttcttacagccactcctagg
tcgaaggctgattttgagaagcagatgtacatattgaggagggtgtcgatggtagctatt
acagctgcactaaaccttcaatatggtggtgttaaggacttttatatctgttccctttcc
tcaaggacggttgtttataaaggtcagttgaagcctgaccagttgaaggcttactattat
gcagatcttggcaatgaaacgtttacgagctacatggccatggtgcactcacgattttca
acaaatacatttcctagctgggatcgtgctcaacccatgcgtgtcttgggccataatggg
gaaatcaacacgctcagaggcaatgtgaactggatgaaggctcgtgagggccttttaaag
tgcaaggagctcggtctctcaaagaatgagatgaagaagattcttcctattgtagatgct
agttcttctgattcaggggcttttgatggtgtgcttgagcttctaattagatccgggaga
actctccctgaggctgtcatgatgatgattcctgaagcctggcaaaatgacaagaacatg
gatcctcaaaggagggcactgtatgaatattcctcagcccttatggaaccatgggacggg
cctgcacttatctcatttactgatggccactacttaggagctactctggaccgcaatggg
ttacgtccaggtagattttacgtcacacgaagtgggcgagttatcatggccagtgaagtt
ggtgttgtggatattcctcctgaagatgtccttaggaaaggacggcttaaccctggaatg
atgcttctggtggattttgagaagcatacggtagtggatgatgaagccttgaagcaacaa
tattccttagcgaggccctatggggagtggttgaagaggcaaaagattgaactcagtgac
atagttaactcagttcaagaatctgataaagttgctccagccatttctggggttgtcgcc
gcatctgatgatgatgacagtatggtgcatatgggcattcatggattgttggcaccatta
aaatcctttggttatactgttgaagccttggagatgctgatgcttcccatggcaaaggac
ggtactgagcctcttggttcgatgggaaatgacgcccccttggctgtcatgtctaacagg
gaaaagctcacttttgagtacttcaagcaaatgttcgctcaagtgacaaatcccccaatt
gatcctatcagagagaagattgtcacttccatggaatgcatgattgggccagaaggagat
ctgacagaaacaactgaagaacaatgccgccgtctctctctaaaaggcccacttttatca
atcggggaaatggaagcgatcaaaaagatgaactataatggttggcgaagcaaagttctt
gacataacttattcaataaaacggggcaggaagggattggaggagactttagataggatt
tgtactgaagctcatgaggcaatcaaggaaggttatactgtgttggttctttctgacaga
gccttctcatcaaagcgtgttgctgtcagctccctcttggctgttggcgctgtccaccaa
tatcttgtaaaaaagcttgagcgtactcaagttgggttgatagttgaatctgctgaacca
cgtgaagtgcaccatttctgtacattggttggttttggtgcagatgccatctgcccatac
ttagccatagatgccatttggagattacaggttgatggtaagatcccaccaaaatccact
ggcgagttacactcaaaggatgagctagtcaagaagtatttcaaagcaagcaactatggc
atgatgaaggtgcttgcgaaaatgggaatttcaactttggcatcctacaagggtgctcag
atttttgaagggctgggcctttcatcagaagtgattgacaagtgctttgcaggaacccca
agcagggtagaaggagcaacatttgagatgcttgctcatgattcacttcgtttgcatgag
ttggcgtttccctcccgtgctctccctcctggaagtgcagaagctgtagctcttcccaat
cctggggattatcattggagaaaaggtggtgagattcaccttaatgatcctcttgctatt
gcaaaacttcaagaagctgccagaggtaatagtgtggctgcctataaggaatattctaag
cgcattcaggagttaaacaaagcttgtaatttgcgtgggcttttgaagttcaaagtggca
gatgtgaaagtttctttggatgaagtggaaccagccagtgaaattgttaaacggttctgt
actggggctatgagttatggatcaatatcattggaggcacacaccacgttggctcaggct
atgaataaaattggaggaaaatcaaatacaggtgagggaggtgaacaaccatctcgtatg
gagcctcttcctgatggttcaatgaatccaaagaggagtgctattaagcaagttgcaagt
gggagatttggagtttcaagttactatcttacaaatgctgatgaactgcagataaagatg
gctcagggtgccaagcctggtgaaggaggtgagcttcctggtcacaaggtcataggagac
attgcagttaccagaaattctactgcaggggtgggtcttattagtcctcctccccatcat
gatatctattcaattgaagaccttgcccaattgattcatgaccttaagaatgccaatcca
tcagcaagaataagtgtcaagttggtatctgaagctggcgtgggagtaattgccagtggg
gtggtgaagggacatgctgatcacgttttgatctcaggccatgatggaggtacaggtgct
tctagatggactggcatcaagagtgctgggctcccatgggaacttggtttggctgagacc
catcaaacacttgttgccaatgaccttcgtggccgaacagttcttcagactgatggccaa
ctaaaaactggccgtgatgtggccattgcggctcttcttggtgctgaagaatttggcttc
agcactgccccccttataacacttggctgcatcatgatgcgaaagtgccataagaacacc
tgtcccgtaggcattgctactcaagatccagtgctgagggataagtttgctggagaacca
gaacacgttattaacttcttctttatgctagcagaggagctcagagagatcatggctcag
cttggtttccgtactatgaatgagatggttggtcgttcagacatgcttgaagttgataaa
gaagttgttaagagcaatgagaagctggaaaatattgatctctcctcgttacttagacct
gctgctgacattcgacctggagctgcccaatattgtgtccaaaagcaggatcatggtttg
gacatggcattggatcaaaaactcatcaaactttctgaggctgcattggaaaaaagtctt
cctgtgtacattgaaacacctatccgcaatgtgaaccgtgctgtcggaacaatgcttagc
catgaagttactaagcgttaccacttggcagggcttcctgccgatactatccatatcaaa
ctcaaaggaagtgcagggcagagcctgggagcttttctttgcccaggcattatgctggag
ctggaaggtgatggcaatgactatgtcggtaaaggattatcaggtgggaagattgtagtt
tatcctccaaaaggaagcctcttcgatccgaaagagaacattataattggtaatgtagct
ctttatggagccacaggtggtgaagcatatcttaatggaatggcagcagaaagattttgt
gtccgtaattctggagcaagggctgttgtagaaggtattggtgatcatggctgcgagtac
atgacaggtgggactattgttgttcttgggaaaactggcaggaattttgctgctggtatg
agtggcggcgttgcttatgttctcgatttggatgggaaattcaaatctcgatgcaatctt
gaacttgttgatcttgataaagttgaggaggaggaggacattatgactctaaaaatgatg
atacaacaacaccagcgtcacacaaacagccttctagctagagaagtacttgctgatttt
gataatcttctgcctaagtttatcaaggtctttcccagggattacaaacgtgttcttgca
aacatgaaagaggaatctgcttcaaaagaggctgctgagcttgctgctaaagaagccgag
gagaaaaatgaagcagagttgagggagaaagatgcttttgaggagctcaagaagatggca
gctgcatccttgaatgggaaatccaatcaggtagtagaagatgaaccactgaaaaggcct
acccgggttaataatgctgtcaaacatagaggcttcattgcttatgagcgtgaaggtgtt
caatacagagatcctaatgttcgaatgaatgactggaaggaagttatggagtcgtcaaaa
cctggccctctattaaatacgcagtcggcccgttgcatggactgtggcactcctttctgt
caccaggaaaactcgggatgccctcttggaaacaaaattcctgaatttaatgaattagtg
caccaaaataggtggcgcgaagcattagacaggttgcttgagacaaataacttcccagag
ttcactggcagagtgtgccctgcaccttgtgaaggttcctgtgttcttggcataattgat
gatcctgtctcaataaaaaacattgaatgttcaattattgacaaggcttttgaggagggt
tggatggtgccgcggcctcccctcaagagaactgggaaacgagtggctattgttggaagt
gggccttctggtttggctgctgcagatcaactaaacaaaaggggtcatttggtgactgtg
tatgagcgtgctgatcgaattggagggctaatgatgtatggagttcccaacatgaaaact
gacaaagtggatatagttcaacgtcgtgttaatcttatggccaaggaaggcatcaatttt
gtggtcaatgctaatgttggtatcgaccctctgtactctcttgatcagctaagacaggag
aacgatgctattgttttggcagtgggagccacaaaacctagggaccttccggtacctggt
cgggagatgtctggtgtccattttgccatggagtttcttcacaaaaataccaaaagtttg
cttgacagcaatctacaggatggtaactacatatctgcaaagggcaagaaagtagttgtc
attggtggaggtgacactggaacagattgcatggggacatctattcgccacggttgcagt
ggcgttgtaaatctagagcttctacctgagccaccacaaactagagctccgggcaaccca
tggccacagtggcctaaagtattccgggtagactatgggcaccaggaagctgcttccaag
tttgggaaagacccaaggtcttatgaggtgttgactaagcgtttcattggagacgaagat
gggagcgtgaagggacttgaggtggtacgtgtccattgggagaaggatgctagtgggaaa
tttcagtataaggaggttgagggctctgaggaaattattgaggctgacctagtcctgcta
gctatgggattccttggtcctgaaccgaatgtggcaaagaagttgggcttggagcaagat
aatcgatcaaacttcaaggcagaatatggccgcttctcaaccaatgtggaagggatcttt
gccgccggggattgcaggcgaggccagtcgctagttgtatgggcaatatcagaaggacga
caagctgcttcccaggtggacaaatatctcatgaaagaagaggatgttacaattagcact
gataacacccaggatgaacttgtcaagaagcacgaagacctcaccaagaggcatcaagac
agcagcaaacacactgtcatgacataa
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integrated database retrieval system
