Populus trichocarpa (black cottonwood): 18104909
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Entry
18104909 CDS
T01077
Name
(RefSeq) phosphatidate phosphatase PAH2
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00561
Glycerolipid metabolism
pop00564
Glycerophospholipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
18104909
00564 Glycerophospholipid metabolism
18104909
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18104909
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
18104909
Protein phosphatases and associated proteins [BR:
pop01009
]
HAD phosphatases
Other HAD phosphatases
18104909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
APP1_cat
Motif
Other DBs
NCBI-GeneID:
18104909
NCBI-ProteinID:
XP_024440450
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All DBs
Position
14:complement(1935303..1944830)
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AA seq
1073 aa
AA seq
DB search
MNAVERLGRYITRGVYTVSGPFHPFGGAVDIIVVEQPDGSFKSSPWYVRFGKFQGVLKAR
EKVVNVSVNEVEADFHMYLDRRGEAFFLREVEGDEEESVLYPLSSSDETDEQSQKNRRPA
KTKSCNYDAYQLNSGDQLDGTNGSIVARTNSRRSRILGLVFGRGSFKEDSCREGDDGAGK
ARTSLERAEIAADLLEVRWSTNLDPTKPRKDNDSRFSASDALEGNGDNMPAIDDKSQKES
SLHDAIETNADRCMLAEETVSCNVETGNDLQSGFMSLECSAEEASVEMLTLGSMDQVAET
STMAESVLGEKCGVVSGLSRDIDELSSQNADPDVKAKGVISVVSAPESKISGVPEACSGE
NFGDKQPCDEKDASLPDHATSEEESESRAQSFIYCETSESSTMRLNCYTEQTHETLYLAS
GGPREAHFSAKTLHLTAEPLPEDMLNQQAEDIELKTEHIDASSSFSNQTNPSSCMHIHDK
VNLEVPMIVSKSDAQKVGADPVLGSAEELESMSTVTILSFSNTGQKTQDVKNNGKEIIRN
EPQSAVDSFGGSEHFYGSCGPTKTAIIPAPESSEEEQFIFSDLDELKPSRTQCESNFLGE
KDEENDPSFCLERNEEMDGSFDTSDVSCSSPDQFVQESKLADLETSRENSKITSSPIGIP
KVHSVTDAEVSRLVESLPNMRSRFDNMDANDLHFPLSHSLDSICKSLEETLCRTNESECV
KLDTENEIQSAKEHSNIEGIHNSEDLENSVSSSTFGDSSKVIVASGGSWRIWPFSFKRSR
SRKISQQALNDTRSSVSENMSDCNLHTDKDYGVINPKVTKKMVRANTPTSEQLASLNLKE
GRNVVTFTFSTAMLGKQQVDARIYLWKWNTHIVISDVDGTITRSDVLGQFMPMVGVDWSQ
MGVAHLFCAIKENGYQLLFLSARAISQAYHTRQFLVNLKQDGKALPDGPIVISPDGVFPS
LFREVIRRAPHEFKIACLEDIRALFPSDRNPFYAGFGNRDTDEISYLKVGIPKGKIFIIN
PKGEVAVNRRVDTKSYTSLHALVHGMFPPMTSFEQEDFNSWNYWRLPPPVIDI
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgtggagagactaggaaggtatatcactcgaggggtgtacacagtctctgga
ccatttcacccttttggtggagctgtggatataattgtagtggaacagccagatgggagc
ttcaagtcatctccttggtatgtccggtttggtaaatttcaaggggttttaaaggcgcga
gagaaagtagtgaatgttagtgtgaatgaagttgaagcagattttcacatgtatcttgat
aggagaggggaagctttttttctcagagaggtagaaggggatgaagaggaatctgtttta
tatcctttgtcctccagtgatgagacggatgagcaatctcaaaaaaataggaggccagcg
aagacaaaaagttgcaattatgatgcctatcagttgaattcaggcgaccagcttgatgga
accaatgggagtattgtggctaggactaattcccgccgttcaaggatattagggcttgtt
tttggacgtggctcattcaaggaggatagttgccgagagggagatgatggtgctggcaag
gcaaggacttcactggagcgtgctgagattgcagctgatctgttggaggtgaggtggtct
actaatcttgaccccactaagcctaggaaagataatgattcaaggttttctgcttcagat
gcattggagggtaatggagataatatgcccgctattgacgacaaaagccagaaggagtca
tctttgcacgatgccattgaaaccaatgctgaccgctgtatgttggctgaggaaactgtt
tcctgcaatgtagagacgggaaacgacttgcaatctggcttcatgagcctcgagtgttct
gctgaggaagctagtgtagaaatgttaactttaggtagcatggatcaagttgctgaaact
tccacaatggctgaaagtgttttgggtgaaaagtgtggggtggtatctggattatcaaga
gatattgatgaacttagttcccaaaatgctgatcctgatgttaaagctaagggtgtcatc
tctgtggtctctgctcccgagtcaaaaatttctggcgtccctgaagcgtgttcaggcgag
aattttggtgacaaacagccttgtgatgaaaaagatgcttctttaccagatcatgccact
tccgaggaggagagtgaatccagagctcaatccttcatttattgtgagacatcagagagc
tcaacaatgaggctgaactgttatactgaacaaactcatgaaacactgtaccttgctagt
ggaggacccagggaagcacacttttccgccaaaactttgcatttgacagctgagccacta
cctgaggacatgctcaatcagcaagctgaggacattgagttgaagacagaacacattgat
gctagcagcagtttttctaatcaaacaaatccatcttcttgcatgcatatccatgataag
gtgaaccttgaagttccaatgatagtgtcaaaatccgatgctcaaaaggttggtgctgac
cctgtgcttggttcggctgaagaattagagtcaatgagcactgttaccattttgagtttt
agcaacacaggccaaaaaacacaagatgtgaaaaataacggcaaggaaattatcaggaat
gagccccaatctgcagtggattcatttgggggttcagaacacttttatggtagttgtggt
ccaacaaaaacagctattattcctgccccagagagttcagaggaagagcagttcattttc
agtgaccttgatgaactcaaaccaagcaggactcagtgcgagtcgaattttcttggtgaa
aaagatgaagaaaatgatccttcattctgtttggaaagaaatgaagaaatggatgggtct
tttgatacaagtgatgtatcttgttcatccccggaccagtttgttcaagagagtaaactg
gctgatcttgaaacctcgagagaaaattcaaagataacatcaagtcccattggcattccc
aaagttcatagtgttactgatgctgaagtctctaggctggttgaatcgttacccaacatg
aggtctcgttttgacaacatggatgcaaatgatctccattttcccttaagccactcgcta
gactccatttgcaaatccttggaggagacattatgtagaacaaatgagtcagagtgtgta
aagttagatacagaaaatgaaatccaatcagcaaaggagcattctaatattgaaggtatt
cacaattcagaagatcttgaaaattctgtttccagctctacttttggggattcatcgaaa
gtgattgttgcttctggcggaagctggagaatttggcctttctctttcaaaagatcaagg
tctaggaagatttcacagcaagctctaaatgataccagaagttctgtctctgagaacatg
tcagattgcaaccttcacacagataaagattacggtgtaattaatcctaaggtcaccaaa
aaaatggtaagggccaatactccaacatctgaacaactggcatccttgaatctgaaggaa
gggaggaatgtggtgaccttcacgttttccactgcaatgctggggaagcagcaggttgat
gcaagaatttatctgtggaaatggaacactcacatagtgatctccgatgttgatgggacg
attacaagatcggatgttctaggtcagttcatgcctatggttggggtagactggtcacaa
atgggcgttgcacatttgttttgtgctattaaggaaaacggctatcaattactttttcta
agtgcacgtgcaatttctcaagcctatcatactagacaatttctagtcaacctcaagcag
gatgggaaggctttaccagatggtcctattgttatatctcccgatggagtttttccttct
ctatttcgcgaagtcattagaagggctcctcatgaattcaagatcgcatgtttggaggat
atcagggctttgtttccttctgatcgcaatcctttctatgctggttttggaaatagagac
actgatgagataagctacctcaaggttggaatcccgaagggaaaaatcttcatcattaat
ccgaagggtgaagttgctgtgaaccgccgtgttgacacaaaatcatatacttcacttcat
gctcttgtgcatggcatgtttccacccatgacatcatttgagcaggaggattttaattca
tggaattactggagattgcctcctccagttattgacatatga
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