Populus trichocarpa (black cottonwood): 18107368
Help
Entry
18107368 CDS
T01077
Name
(RefSeq) malate dehydrogenase, chloroplastic
KO
K00026
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop00270
Cysteine and methionine metabolism
pop00620
Pyruvate metabolism
pop00630
Glyoxylate and dicarboxylate metabolism
pop00710
Carbon fixation in photosynthetic organisms
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
Module
pop_M00012
Glyoxylate cycle
pop_M00168
CAM (Crassulacean acid metabolism), dark
pop_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
18107368
00620 Pyruvate metabolism
18107368
00630 Glyoxylate and dicarboxylate metabolism
18107368
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
18107368
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
18107368
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
18107368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
3Beta_HSD
Semialdhyde_dh
Epimerase
FliC_D2
Motif
Other DBs
NCBI-GeneID:
18107368
NCBI-ProteinID:
XP_006373422
LinkDB
All DBs
Position
17:complement(11318436..11321703)
Genome browser
AA seq
412 aa
AA seq
DB search
MAAASAATFSVGSAFSFGTKASQLPQSKLSSVRFNSQSSLATFSGLKAATFVTCESESSF
LGKESNAALRCSVAPKAQKSSQRSQHRLNPQASYKVAVLGAAGGIGQPLALLIKMSPLVS
ALHLYDIANVKGVAADLSHCNTPSQVLDFTGAAELPNSLKGVDIVVIPAGVPRKPGMTRD
DLFNINASIVKTLVEAVADNCPDAFIHIISNPVNSTVPIAAEVLKKKGVYDPKKLFGVTT
LDVVRANAFVAEKKNLKLIDVDVPVVGGHAGITILPLLSKTKPSVSFTDEEVQELTVRIQ
NAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDADVYECSFVQSDLTDLPFFASR
VKLGRKGVETIISSDLQGLTEYEQKALEALKPELKASIEKGIAFAQREPVAA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcatcagcagctaccttttcagttggatctgctttctcctttggcaccaaa
gcgagccaactcccgcaatcaaagctctcatctgtgagattcaactcccagagctcactt
gcaacgttcagtggtctcaaggctgcaacatttgtgacgtgcgagtcagagtcatctttc
ttaggcaaggaaagcaatgcagcccttcgatgctctgttgcaccaaaagctcaaaaatca
agccaaaggtcacagcatcgcctaaacccacaggcatcctacaaagtggctgttcttgga
gctgcaggagggataggtcagcctttagcacttctaattaagatgtccccattggtttca
gccctgcacctctatgatatagcaaatgtcaagggagttgctgctgacctcagtcactgt
aacactccctcgcaagttctggatttcacaggagctgctgaattacccaattctttgaaa
ggtgtagacattgttgtcatacctgctggagttcctaggaagcctggtatgacccgtgat
gacctcttcaacatcaatgccagcattgtaaagaccttggttgaggctgttgctgataac
tgccctgatgcttttatccacattatcagcaatccagtcaactctacagtgccaattgca
gctgaagttttgaagaagaagggtgtgtatgatccaaagaagctctttggtgttactaca
cttgatgtggtgagggcaaatgcatttgttgctgagaagaaaaacctcaagcttatcgat
gtggatgtaccagtggtgggagggcatgctgggataaccattcttccccttctatcaaag
acaaaaccctctgttagtttcactgatgaggaagtgcaggagctaactgtgaggatccag
aatgcagggacagaagttgtggaggcaaaggcaggcgcagggtctgctaccctgtcaatg
gcatatgctgcagccagatttgttgaatcttctcttcgtgcgttggacggtgatgctgat
gtctatgagtgctcgtttgtgcaatcagatcttactgatcttccattcttcgcatcaagg
gtaaaacttgggaggaagggggttgaaactatcatttcatctgacctccaagggctgact
gagtatgaacagaaggcactggaagctctcaagcctgaactgaaggccagcattgagaaa
ggtatcgcatttgctcagagggaaccagtggctgcatag
DBGET
integrated database retrieval system
