Populus trichocarpa (black cottonwood): 18107561
Help
Entry
18107561 CDS
T01077
Name
(RefSeq) L-arabinokinase isoform X1
KO
K12446
L-arabinokinase [EC:
2.7.1.46
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
pop01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
18107561
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.46 L-arabinokinase
18107561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GHMP_kinases_N
GalKase_gal_bdg
Glyco_trans_1_3
Glyco_transf_4
GHMP_kinases_C
Glyco_tran_28_C
Motif
Other DBs
NCBI-GeneID:
18107561
NCBI-ProteinID:
XP_006371825
UniProt:
U5FJT5
LinkDB
All DBs
Position
18:complement(209080..220169)
Genome browser
AA seq
990 aa
AA seq
DB search
MRIEESDGVSASRKHLVFAYYVTGHGFGHATRVVEVVRNLILAGHDVHVVTGAPDFVFTS
EIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRESILATEIEWLNSIKAD
LVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGNHHRSIVWQIAEDYSHCEF
LIRLPGYCPMPAFRDVIDVPLVVRRLHKTRKEARKELGISDDVKLVILNFGGQPSGWKLK
EEYLPSGWLCLVCGASDSQELPRNFIKLAKDAYTPDLIAASDCMLGKIGYGTVSEALAFK
LPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLLTGHWKPYLERAISLKPCYEGGING
GEVAAHILQETAIGKNYASDKFSGARRLRDAIVLGYQLQRVPGRDISIPEWYSSAENELN
KSTGSPTTQIIENGSLTSICTDDFEILHGDLQGLPDTKSFLKSLAELDTVYDSEKNSEKR
QMREHKAAAGLFNWEEDIYVARAPGRLDVMGGIADYSGSLVLQMPIKEACHVAVQRNHAS
KHRLWKHAQARQNAKGQGPTPVLQIVSYGSELSNRGPTFDMDLSDFMDGEMPISYDKAKT
YFAQDPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSA
IAAAHGLSISPRDIALLCQKVENHIVGAPCGVMDQMTSACGEANKLLAMVCQPAEVIGLV
EIPSHIRFWGIDSGIRHSVGGADYGSVRIGAFMGQKMIKSIASSTLSRSLPSANGLIHDE
LEDHSVDLIKAEASLDYLCNLSPHRYEALYAKMLPESILGETFLEKYIDHNDAVTIIDEK
RTYVVRAPANHPIYENFRVKAFKALLTSTSSDEQLTALGELLYQCHYSYSACGLGSDGTD
RLVRLVQEMQHGKPSKSEDGTLYGAKITGGGSGGTVCVIGRNCLRSSQQILEIQHRYKGG
TGYLPFIFEGSSPGSGKFGYLRIRRPVSIT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagaggaaagcgatggagtatcggcgtcgagaaagcacctggtgtttgcctat
tatgttaccggtcatggttttggccatgccactcgtgttgtcgaggttgttaggaacttg
attttggctgggcatgatgtgcacgtggtcactggtgcacctgattttgtcttcacctct
gaaattcagtcgcctcgtctcttcattcgcaaggtattattggactgtggagcagtacag
gcagatgcattgaccgtggatcgccttgcgtcgttggagaagtattcggagacggctgtg
aagccccgggaatctattttggctactgagatagagtggctgaactccatcaaagctgac
ttagtggtttctgatgttgttccagttgcgtgccgtgctgcagctgatgcaggaattcga
tctgtctgtgtcaccaacttcagttgggacttcatctatgcagagtatgtcatggcagct
ggaaatcatcatcgttcaatagtttggcagatagcagaggattactctcactgtgaattc
ctaatccgcctcccaggatattgcccaatgcctgcttttcgggatgttattgatgtacct
cttgttgtgaggaggttgcacaaaacccgcaaggaggcaaggaaggaacttggcatcagt
gatgatgtgaagctggtaatccttaactttggtggacagccatctgggtggaagttgaag
gaggagtacttaccttctggttggctttgcctggtttgtggtgcttctgacagccaggag
cttccacgaaatttcataaagcttgcaaaagatgcctacacacctgatcttattgcagca
tcagactgcatgcttgggaaaattggatatggcactgtcagtgaagccctggcattcaag
ctaccatttgtctttgtgcgaagagattatttcaatgaagaaccctttttgagaaatatg
cttgagtattaccagtgtggtgttgagatgattaggagagatttactcactggccactgg
aaaccttatcttgaacgtgcaattagtttgaaaccatgctatgagggaggcattaatgga
ggcgaggtggcagctcacattttgcaggagacagctattggtaaaaactatgcttcagat
aagttcagtggagcaagaagattgcgagatgccattgtccttggttatcaattacaaagg
gtccctggacgagatatcagcatcccagaatggtattcaagtgctgaaaatgaactcaat
aaatctaccgggtctccaactacccaaataattgaaaatggatccctaacaagcatatgc
actgatgattttgagattctacatggagatcttcaaggccttccagatacaaagagtttc
ttaaagagcttggcagagctagatactgtatatgactctgagaagaactctgagaagcgc
caaatgcgggaacataaggctgctgcaggactctttaattgggaggaagacatctatgtg
gcaagagcacctgggagattggatgtaatgggagggattgctgactattcaggaagtctt
gtgttgcagatgcctattaaagaagcctgtcatgttgctgtgcaaaggaaccatgcaagt
aaacataggctctggaaacatgcccaggctcggcaaaatgcaaaaggacaggggcctaca
cctgttcttcaaatagtatcctatgggtcagaattaagcaatcgtggtccaacctttgac
atggatctatctgattttatggatggagagatgccaatatcatatgacaaggcaaaaaca
tattttgcccaagatccatcacaaaagtgggcagcttatgttgcagggacaattcttgtt
ttgatgacagaattaggtgtacgctttgaggatagcattagcatgctggtttcttcagca
gtccccgagggaaaaggggtatcttcttctgcatcagtggaggttgccagcatgtctgct
atagctgctgctcatggattaagtatcagtccaagagatattgctttgctctgccaaaag
gtagagaatcacattgttggagctccatgtggtgtaatggatcagatgacttcagcatgt
ggtgaagccaacaaacttcttgcaatggtgtgccagcctgcagaggttattgggcttgta
gaaattcctagccatattcgtttctggggaattgattcaggaatacgacacagtgttggt
ggtgcagattatggatctgtaagaataggtgccttcatgggtcaaaagatgattaagtct
atagcatcatctactttgtccagatcactgcccagtgctaatgggttaatccatgacgag
ttggaggatcatagtgtggatctaatcaaagctgaagcttcattggattacttgtgtaac
ttatcaccacacagatatgaggctctctatgctaagatgcttcctgaatccatccttgga
gagacctttctggagaagtatattgatcataatgatgctgtcacgataattgatgagaag
cgcacatatgttgtgagagcaccggctaatcatcctatatatgaaaacttccgtgtcaag
gccttcaaagcattgttaacttccaccagttcagatgagcaacttacagctcttggagaa
ctattgtatcagtgtcactatagctacagtgcttgcgggcttggttctgatgggacagat
aggcttgtgcggttggtacaggaaatgcaacatggcaaaccatcaaaatctgaagatggg
actttatatggagcaaaaataactggtgggggttctggtggaacagtttgtgtaatcggt
aggaactgtcttagaagcagccaacaaattctggagattcagcacagatacaaaggcgga
actggctatttgccatttattttcgagggttcgtcgcctgggtcaggaaaattcggatac
ttgagaattcgccggccagtgtccataacttag
DBGET
integrated database retrieval system