Populus trichocarpa (black cottonwood): 7454716
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Entry
7454716 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7454716
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7454716
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
7454716
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7454716
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
7454716
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: Other
RIO family [OT]
7454716
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Kinases
7454716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase_fungal
TCAD9
B3R
Motif
Other DBs
NCBI-GeneID:
7454716
NCBI-ProteinID:
XP_002322256
UniProt:
B9IFB5
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All DBs
Position
15:complement(11753234..11757460)
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AA seq
559 aa
AA seq
DB search
MSDTQRSIDQLEPLTSLNEAKPEVEEQVSEEEDSWSSDSEIADALDWLDTRNDDDSIDSS
ITLNSRRPNAHGGLHSRPNSSTLQPLSNRNQKFSHHIRASPLEEWEGRVKVGMSNSVTTA
IRHSVREMAIGKTRNTEKADRATVEQAIDPRTRMVLFKMLNRGVFNDINGCISTGKEANV
YHATKSDGQELAIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNL
LRLKAAGIRCPTPVLLRLHVLVMEFIGKTGWAAPRLKDAALSLDKLREGYMEMIITMRSL
YQKCKLVHGDLSEYNILYLEGRLYIIDVSQAVDLDHPHALDFLREDCLHVSDFFKKHGVA
VMTIRELFDFIVDPTINDESIDSYLEEVQQKILTRDLTAEDEIADSVFVQSYIPKTLDDV
KHAEEDVNRITSGNDTGDMYYKTITGLKEALSNSSAAQQERQQVDANPVEESSVIQDGHS
NSPESESDSGTDSEEEGSGDSDGSGSSSETEKQDPVDKKAARKENKKKVKEEKREARKTK
TPKAMKKRKKKMAKAKKTR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatacacaacgaagtatcgatcaattagaacctctaacatcattaaatgaagcc
aagcccgaagttgaagaacaagtatccgaggaggaagattcttggtcatcagactctgaa
attgccgacgcgttagactggttagataccagaaacgacgacgattcaattgacagctcg
atcactctcaattcacgccgtcctaatgctcacggcggccttcactcgcgtcctaattct
tcaactcttcaacctctctctaatcgcaatcagaagttctcgcatcatatccgcgcttct
cctttagaggaatgggaagggagagtgaaagttggaatgtcgaattcagttacgactgcc
attcgccatagtgtgagagagatggctattgggaaaactagaaataccgagaaagccgat
cgcgctactgttgagcaggctatcgatcctagaacgcgtatggttttatttaaaatgttg
aatcgcggtgtgtttaatgatatcaatggctgcatttcaacaggaaaagaggcaaatgtt
tatcatgcaacaaaatctgatggtcaggaactagcaatcaaagtgtacaaaacttcggtc
ttggtttttaaagatcgagatcggtatgtacaaggtgactaccgtttccgacatggatat
tgcaagcacaatcccagaaaaatggtaaagacgtgggctgaaaaagaaatgaggaatctt
ttgaggctaaaagcagcaggaatcaggtgcccaacacccgtacttttgagacttcatgtt
ctggtcatggaattcataggaaaaactggttgggccgctcctcgtctaaaggatgctgcc
ttatctttggacaagttgcgtgaaggttatatggagatgattattaccatgcggagttta
tatcagaagtgtaagctagtgcatggagacctcagtgagtacaacatcctttacttggag
ggtcgcttgtatataattgatgtctctcaagcagttgatcttgaccaccctcatgccctt
gactttttgcgtgaagattgtcttcatgtttctgatttctttaagaaacatggtgtagca
gtcatgactatccgggagctgtttgacttcatagtggatccgactattaatgatgaatcc
attgacagttacttggaagaggttcaacaaaaaattttgacaagagatttgactgcagag
gatgaaattgctgactctgtatttgttcagtcatatattccgaagacattagatgatgtc
aagcatgccgaggaggatgtaaaccggataacaagtggcaacgatactggagacatgtac
tataagactattactggactaaaggaggctctctctaactcttctgcagctcaacaagaa
aggcagcaagtggatgcaaacccagtagaagagtcttcagtcattcaggatgggcattca
aactctcctgagagtgaatccgactctgggacagattcagaggaagagggctccggtgat
tcagatgggagtggttcatcatcagaaaccgagaaacaggatcctgttgataaaaaagcc
gcgagaaaagagaataagaagaaggtcaaggaggagaagagggaagctcgaaagactaaa
actcccaaggctatgaagaaaagaaaaaagaaaatggccaaagccaaaaagactaggtaa
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