Populus trichocarpa (black cottonwood): 7455989
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Entry
7455989 CDS
T01077
Name
(RefSeq) poly [ADP-ribose] polymerase 2 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
7455989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7455989
03036 Chromosome and associated proteins [BR:
pop03036
]
7455989
03400 DNA repair and recombination proteins [BR:
pop03400
]
7455989
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
7455989
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
7455989
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
7455989
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
7455989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
SAP
DUF1796
Motif
Other DBs
NCBI-GeneID:
7455989
NCBI-ProteinID:
XP_052302733
LinkDB
All DBs
Position
14:complement(8582507..8587865)
Genome browser
AA seq
636 aa
AA seq
DB search
MANSLKRPLKVSTGHDASSLGNKRQREAQVLDGPDIVSEKIKAIEDLHDMGTRQLREQAI
LRGLSSSGSKKELLDRLCAESEKESKNGTPEGKEEDEEKETSNKDEKVTASFNKVTAELD
QYLPDHLKTQYHVLEHGDSIYDATLNQTNVGNNNNKFYLIQALESNDSSKFMVYTRWGRV
GIKGQDKLQGPYTSRGSAIQEFEAKFFAKTKNRWPNRKDFICHPKCYTWLETDHDMNKES
SEENPIFTVERQLQVTRLDPRIANFISLICDVRMMKQRMMELGYNAEKLPLGKLSKSTIL
KGYDVLRRICENIGKSDTEKLEELSGEFYTIIPHDFGFNKMREFTIDNHYKLKCKLEMVE
ALGEIEIATSLIKDDIYTQVLISDCLLTFIVKLCYLLLFSSYLIFCSDLIFKKDPLYSKY
HCLRCELVPLDVVSKEFSMIEKYIRNTGDETHYRIDIVQIFRASREGENERFKKFSQTKN
RMLLWHGSRLTNWTGILSEGLRIAPPEAPSTHSLGNGLYFGDMFSKSAPYCHANWINSDA
VLVLCEVALGDMLDYGSFNCHDKLPKGKLSVKVAGGTVPDSSQAQVLEDGVLVPLGKPVE
LPYSQGMWPRNEYIILDVDQIRIRYVVHAKFCYQTC
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagtctcaagaggccgttaaaagtctcaaccggtcatgatgcttcatcactt
ggcaacaagaggcaaagggaagcacaagtacttgacggtcctgatatcgtgtctgagaaa
atcaaggccattgaagatcttcacgacatgggaactcgccaactacgcgaacaagcaatc
ctccgaggcctttcttcaagtgggtcaaagaaagaactactagacaggctctgtgcagag
tcagagaaagagtcaaagaacggtacacctgaaggcaaagaagaagacgaagaaaaagaa
acaagcaacaaggacgagaaagttactgcgagtttcaacaaggtcactgccgagctggat
cagtatctgcctgatcatttaaagacacagtaccatgttctagagcatggggatagtatc
tatgatgccacgttgaatcaaacaaatgttgggaataataacaacaagttctatctgatt
caggctcttgaatctaatgactctagcaaattcatggtatacactagatggggtagagta
ggaattaaaggtcaagacaagttgcaaggcccttacacatcaagaggcagtgctattcag
gagttcgaagcaaaattttttgccaagacaaagaaccgttggcccaaccggaaagatttc
atatgccacccaaagtgctatacttggttggaaacagaccatgacatgaacaaagagtcg
tcagaggagaaccctatttttactgttgaaaggcaactacaggttacaaggcttgatcct
cgaattgcaaattttatctctcttatctgtgatgttcgcatgatgaagcagcggatgatg
gaattagggtacaatgcagaaaagttaccccttggtaagctgagcaagtcgacaatctta
aagggctatgatgtcttgaggagaatatgtgagaatattggcaaatctgatacagaaaag
cttgaggagttaagtggggaattctacacaataatacctcatgactttggttttaataag
atgcgtgaatttaccattgacaaccattacaaactgaaatgcaagctggaaatggttgaa
gctctaggggaaattgaaatagctacatcattgatcaaggatgatatctacacccaagta
ttgatttctgattgtttactcactttcatcgtcaaattgtgctacttgctgcttttcagt
agttatctgattttctgttctgacttaattttcaagaaagatccgctctattcgaaatat
cactgccttcgttgtgaattggtaccacttgatgttgtttccaaggaattctctatgatt
gaaaaatacatacgtaacactggtgatgaaacacattatagaatcgacattgttcaaata
tttagagcttcaagagaaggtgaaaatgaacggttcaaaaagttctctcaaacaaaaaac
agaatgcttttgtggcatggttctcggctgacaaactggaccggtattttgtctgaaggt
ttacgtattgctcctccagaagcaccatcaactcattctcttgggaacgggctttatttt
ggtgatatgttttccaaaagtgcaccttattgccatgctaactggataaactcagatgct
gtgctagttttgtgtgaggttgcactgggtgacatgcttgattatggatcttttaactgc
catgataagttgccaaagggaaagctaagtgtaaaagtagctggaggaactgtcccggac
tcttcacaggctcaggttcttgaagacggtgttcttgttccactcggaaagccagtagag
ctgccttattcccagggtatgtggccgagaaatgagtacataattcttgacgtggatcag
attcgaatacgttatgtggttcatgcaaagttctgctatcaaacctgttga
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