Populus trichocarpa (black cottonwood): 7462234
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Entry
7462234 CDS
T01077
Name
(RefSeq) omega-amidase, chloroplastic isoform X1
KO
K13566
omega-amidase [EC:
3.5.1.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00250
Alanine, aspartate and glutamate metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
7462234
Enzymes [BR:
pop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.3 omega-amidase
7462234
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Motif
Pfam:
CN_hydrolase
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
7462234
NCBI-ProteinID:
XP_006381999
UniProt:
U5GBV1
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Position
6:complement(22824618..22829658)
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AA seq
373 aa
AA seq
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MKSAISSTTTLLSSKNLSLKLHLNHSPLSRLPSSLFRSKSNTHFPSLLPRNNSTHNQKSQ
IHTPIMASSFMPEQARAPPALPLPVPPVTKFKIGLCQLSVTADKERNIAHARKAIEEAAA
KGAKLVMLPEIWNSPYSNDCFPVYAEDIDAGGEASPSTAMLSEAAGLLKVTIVGGSIPER
SGDRLYNTCCVFDSDGKLKAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRI
GIGICYDIRFQELAIIYAARGAHLICYPGAFNMTTGPLHWELLQRARAADNQLYVATCSP
ARDVAAGYVAWGHSTLVGPFGEVLATTEHEEDIIIAEIDYSLLEVRRTNLPLTKQRRGDL
YQLVDVQRLKSDS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagcaatatcatcaacgacaacactcttgagctcaaaaaatctgagcctgaag
ctccatctaaatcattcccctttatctcgcttaccctcttcccttttccgctcaaaatca
aacacccacttcccttctctcctaccacgtaacaacagcactcacaaccagaaatcccaa
atccacactccaataatggcttcttctttcatgcccgagcaagccagagcccctcccgct
cttcccttacccgttcctcctgtcaccaagtttaagattgggctgtgtcagttatcggtg
acggctgataaagagaggaatattgcgcacgctcgcaaagcaattgaagaggctgctgca
aagggtgccaagcttgttatgttgcctgaaatatggaatagcccgtattcgaatgattgt
ttcccagtttatgctgaggacattgatgcaggtggtgaggcgtctccttctacagccatg
ctctctgaagctgctggtcttctgaaggtcacaattgtgggtggctctataccagaacgt
tctggggaccggctgtataatacatgttgtgtctttgatagtgacggaaagttgaaagcc
aagcaccggaagatacacctttttgatattgacattcctgggaagatcacttttatagaa
tcgaagactctaacagcaggggagactccgaccattgtggacacagaagttggtcgtatt
ggtataggaatctgctatgatattcgttttcaggaactggcaattatatatgcagcaaga
ggtgctcatttgatatgctatcctggggcattcaacatgaccactggaccattacattgg
gagttattgcagagggcaagggctgcggataatcagctatatgtggcaacttgttcgcca
gctcgggatgttgcagctggttatgtggcctggggccattccactcttgtaggacctttt
ggagaagttctggccactactgagcatgaggaggacataattatagcagagattgactat
tcactacttgaagtgagaaggacaaacctccccttgacaaagcaacgaagaggtgatctt
taccagctggtggatgttcagagactgaaaagtgactcgtaa
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