Populus trichocarpa (black cottonwood): 7468593
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Entry
7468593 CDS
T01077
Name
(RefSeq) neutral ceramidase 1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00600
Sphingolipid metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
7468593
Enzymes [BR:
pop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
7468593
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
7468593
NCBI-ProteinID:
XP_024463943
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Position
9:4825771..4832259
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AA seq
780 aa
AA seq
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MEFYPLSNLYLQRPIWFLISLVFLLLLLLNGRVVLSDPNYLIGLGSYDITGPAADVNMMG
YANTEQIASGIHFRLRARSFIVAQPQGNRVVFVNLDACMASQLVTIKVIERLKARYGDLY
TEKNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKCIIQAHENLQPGSI
FVNKGEILDAGVNRSPSAYLNNPAEERSKYKYDVDKEMTLLKFVDAKWGPVGSFNWFATH
GTSMSRTNSLISGDNKGAAARFMEDWFRHSGIGNLYSDEGVADGIPRRVSNIIPGLHDNH
HKLLELAASFQSPPGRPATKILSVARRVRGALRQADKPGFVSAFCQSNCGDVSPNVLGAF
CTDTGLPCDFNHSTCGGKNELCYGRGPGYPDEFESTRIIGERQLKKAVDLFNTASEKLNG
KVDYRHSFIDFSQLEVTLPKQGGGSEVVKTCPAAMGFGFAAGTTDGPGAFDFKQGDDKGN
AFWRLVRNLIKTPGKEQVDCQHPKPILLDTGEMKKPYDWAPSILPIQILRVGQLVILSVP
GEFTTMAGRRLRDAVKTVLMSGGNKKFNSNVHVVIAGLTNTYSQYVTTIEEYEMQRYEGA
STLFGPHTLSAYIQEFKKLAAALTSGQSVEPGPQPPDLLDKQISLLTPVVMDATPPGVHF
GDCSSDVPLNSTFKRGDTVKVVFWSACPRNDLMTEGTFSLVEILQGKDNWFPAYDDDDFC
LLFKWSRPSKLSTRSHATMEWRIPQSANPGVYRMKHFGAAKSLLGSIRHFTGSSSAFVVT
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagttttatcctctttcgaatctttatcttcaaagaccaatttggttcttgatttct
ttagtattcttgctgctgctgctgctaaatggtagagtagtgttatctgatcccaactac
ttaattgggcttggaagctatgacatcactggaccagctgctgatgttaacatgatgggt
tatgctaacacagaacagattgcttctgggattcacttcaggttgcgagctcgttctttt
attgtggctcagccccaagggaaccgtgttgtgtttgttaatcttgatgcttgtatggcc
tctcaacttgtcactattaaagttattgagaggttgaaggcaaggtatggtgacctctat
actgaaaagaatgttgctattagtggcattcatactcatgctggtcctggggggtatctt
cagtatgttgtgtatattgtgacatctcttggatttgtgcgtcaatcattcgatgcgctt
gttgatggcattgagaaatgcataattcaagctcatgaaaatctccaacccggatcgatt
tttgtgaataagggagagatcttagatgccggtgtaaatcgcagccccagtgcatatctt
aataatcctgctgaagagcgcagcaaatacaagtatgatgttgacaaagaaatgaccctt
ttgaagtttgtagacgctaagtggggtccagtaggtagcttcaattggtttgcaacccat
ggaacttctatgagtcgcacaaactcgttgataagtggggataacaagggggcagcagca
cgatttatggaagactggtttcggcacagtggtattggaaacttgtattctgatgaaggt
gtagctgatggaatccctcgaagagtctcgaatattatcccaggcttgcatgataatcac
cataagctactggagcttgcagcatccttccagtctcctcctggccgacctgcaacaaag
attcttagtgttgcaaggcgtgtcaggggtgctctcaggcaggctgacaaacctggattt
gtgtctgcattttgccaatcaaactgtggtgacgttagccccaatgtgctaggagctttc
tgtacagacactggactgccttgtgatttcaatcacagtacctgtggtgggaagaatgag
ttgtgctatggccgagggccaggttaccctgatgaatttgaaagtacccgtatcattggt
gagaggcaactaaaaaaagctgtggatcttttcaacacagcatcagagaaattaaatgga
aaggttgattatcgccactcttttatagacttctcccagctggaagtgacacttcccaaa
cagggaggaggttctgaggtagtaaaaacatgtcctgctgcaatgggttttggatttgct
gctggaacaacagatggacctggagcttttgatttcaagcaaggagatgacaagggaaat
gccttctggagactggtgcgcaacttaataaaaacaccaggaaaggaacaagttgattgc
cagcatccaaagcccatcttgcttgatactggtgaaatgaagaaaccatatgattgggcg
ccctctatccttccaatccagattctccgtgtagggcagctagtcatccttagtgtacct
ggagaatttacaaccatggctgggaggcgtcttagagatgctgtcaagacagtgctcatg
agtggtgggaataaaaaatttaacagtaatgttcacgttgttatagcaggattgactaac
acctattcacagtacgtgactaccattgaagagtacgaaatgcagagatatgagggtgcc
tccacgctctttgggccacacactctcagtgcctacattcaggagttcaagaagcttgca
gctgctcttaccagtggccagtcggtcgagcccggtccacaaccccctgatcttctggat
aaacaaataagcttacttacaccagttgtaatggatgcaaccccacctggtgtccatttc
ggtgattgcagctctgatgtacccctgaactccactttcaaaagaggcgatacagtcaaa
gtagttttctggtcagcttgcccaaggaatgacctgatgacagaaggtaccttttccctt
gtggagatcctccaaggaaaggacaactggttcccagcatatgacgatgatgatttctgc
cttctcttcaagtggtcgagaccttcaaaactgagtactcgtagtcatgcaaccatggaa
tggaggatcccgcagtctgccaaccctggtgtctatagaatgaaacattttggagctgca
aagagccttttaggctctattcgccatttcaccggttcatcaagtgcttttgttgtgaca
tga
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