Populus trichocarpa (black cottonwood): 7469804
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Entry
7469804 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7469804
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop00785
Lipoic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
7469804
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
7469804
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
7469804
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
7469804
NCBI-ProteinID:
XP_002312072
UniProt:
B9HM58
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All DBs
Position
8:complement(3027642..3033526)
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AA seq
1021 aa
AA seq
DB search
MAWFRAGASVARLAIRRTLSQGGSYATRSRVIPSQSRYFHSTVTKSKEQTAPVPRPVPLS
KLTDNFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLLRAYQVNGHMKAKLDPLGLEEREIPDELDPALYGFTEADLDREFFLGVWKMAGFLS
ENRPVQTLRSILTRLEQAYCGSIGYEYMHIADREKCNWLRDKIETPTPMQYNRQRHEVIL
DRLIWSTQFENFLATKWTAAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMPHRGRL
NVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
ANPSHLEAVDPVVVGKTRAKQYYSNDSDRTKNMGILIHGDGSFAGQGVVYETLHLSALPN
YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDMEAVVRVCELAA
EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYQVIRNHPSALEIYKKKLLESGQVT
EEDIHRIQEKVLSILNEEFLASKDYVPKRRDWLASHWSGFKSPEQLSRVRNTGVKPEILK
NVGKAITTLPDNFKPHRAVKKVYDQRAQMIETGEGIDWAVGEALAFATLLVEGNHVRLSG
QDVERGTFSHRHSVIHDQETGEKYCPLDHVTINQNEEMFTVSNSSLSEFGVLGFELGYSM
ESPNSLVIWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVLLPHGYDGQGPEHSSGR
LERFLQMSDDNPFVIPEMEPTFRKQIQECNWQVVNVTTPANYFHVLRRQIHRDFRKPLVV
MAPKNLLRHKECKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDLEEGIRRLVLCSG
KVYYELDEERRKVEAKDIAICRVEQLCPFPYDLIQRELKRYPSAEVVWCQEEPMNMGAYS
YIAPRLSTAMKALGRGTMDDIKYAGRGPSAATATGFYQMHVKEQAELLQKAMQPEPIQIP
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcttggtttagagcgggtgctagtgtagcaaggcttgccattagaaggactttatct
cagggtggatcgtatgcaacgagatcacgggttataccttctcagagtagatatttccat
tcaacagtgacaaagtctaaggagcaaactgcgcctgtccctcgtcctgtccctctctct
aagctaactgataacttcttagatgggaccagtagtgtttatttagaggagcttcagcga
gcatgggaagctgatccaaatagcgtggatgagtcgtgggataatttctttaggaacttt
gtgggccaggctgctacgtctcctggaatttcaggccaaactattcaggagagtatgcgg
ttgctgctgcttctcagggcttaccaggttaatggtcacatgaaagccaagttggatcca
ctggggttggaagaaagagaaatcccagatgaattggatcctgctctatatggtttcacg
gaagctgatcttgatagagaattctttttgggagtgtggaagatggctggatttttgtct
gaaaaccgtccagtgcagactcttaggtccatattgaccaggcttgagcaggcttattgc
gggagcattgggtacgagtacatgcacattgcagatcgtgaaaaatgtaactggttgaga
gacaagattgaaaccccaacacctatgcagtacaatcgtcagcggcacgaagttattctt
gataggttaatatggagtacacaatttgagaacttcttggccactaagtggacggcagct
aagaggtttggactcgaaggtggagagactttgattcctggaatgaaggagatgtttgat
aggtcagctgatcttggggttgagagcatagttattggaatgcctcacagaggaagattg
aatgtactgggtaatgtggttcggaagccgctccgtcaaatatttagcgagtttagtggt
ggcacaaaacctgtagatgaagttgggctctacactggaactggtgatgtcaagtatcac
ttgggaacttcttatgatcgtccaactagaggtgggaagagaatccatttatctttggtt
gcaaatcctagtcacctagaagctgtggatcctgttgttgttggaaaaactagagccaag
caatattactcgaatgattctgacaggactaagaacatggggattttgattcatggtgat
ggtagctttgctgggcaaggggtagtgtatgaaactctacatcttagtgcactgccaaac
tatactactggtggaaccatacatattgtggtgaacaaccaagttgctttcacaactgat
cctagggcaggaagatcttcacaatattgcactgatgttgccaaggccttgaatgcacct
atattccatgtaaatggagatgatatggaggcagttgttcgtgtgtgtgagcttgcagct
gagtggcgccagactttccattcagatgttgtggttgatttagtgtgctatcgtcgtttt
gggcacaatgagattgatgagccttctttcacgcaacccaaaatgtatcaggttattcgg
aatcatccatcagctctggagatctataaaaagaaactcttagaatcaggacaggtgact
gaagaagatattcataggatacaggagaaggtcctttcaatcctcaatgaagagttcttg
gcaagcaaagattatgttcctaaaagaagagactggcttgcatctcattggtctggtttt
aagtctcccgaacagctttcacgtgtcagaaacactggagtgaaacctgagatcttgaag
aatgtaggcaaagcaattacgacccttccagataattttaagcctcacagagctgtaaag
aaggtttacgatcaacgtgcacaaatgattgaaacaggggaaggaattgattgggctgtt
ggggaggctcttgcttttgccacactgctagtagaaggcaaccatgttcgattgagcggt
caggatgttgaaagaggtactttcagtcatcgtcattcagtaattcatgatcaggaaact
ggggagaagtattgccccctggatcatgtcaccatcaaccaaaatgaagagatgtttact
gtcagcaacagctccctttcagagttcggtgttcttggatttgaattgggttactcgatg
gaaagtccaaattcgttggtaatctgggaagctcaatttggtgactttgcaaatggagct
caagtgatatttgatcagttcctgagcagtggtgaatcaaaatggctgcgacaaactggg
cttgttgtgctgcttcctcatggatatgatggtcagggccctgaacattcaagtggacgg
ttggaacgattccttcagatgagtgatgacaatccttttgttatacccgagatggaacca
acttttcgtaagcaaatccaagaatgcaattggcaggttgtaaatgttacaacccctgct
aattacttccatgttttgcggcgtcagatacacagagacttccgtaagccccttgtcgtg
atggctcccaaaaacctacttcgtcacaaggaatgcaaatcaaatctctcagagtttgat
gatgtgcaaggccatcctggtttcgacaaacaggggaccagatttaaacgtctcataaag
gatcagaatgaccactcggaccttgaggagggtatcaggcgtctggttctttgctctgga
aaggtttattatgagcttgatgaagagcgtagaaaggtcgaggcaaaggacattgcaatt
tgtagggttgaacaactatgcccgttcccatatgatctcatccagcgcgagcttaagcga
tatccaagtgcggaggttgtttggtgccaggaagaaccaatgaacatgggcgcatacagt
tacattgcaccacgcctatccactgccatgaaagcattgggcagaggaactatggacgac
atcaagtatgctggacgcgggccatctgctgcaacagccactggtttctaccagatgcat
gtgaaggaacaggctgaacttctgcaaaaagccatgcaacctgaaccaatacaaattcct
aattga
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