Populus trichocarpa (black cottonwood): 7472004
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Entry
7472004 CDS
T01077
Name
(RefSeq) tryptophan synthase alpha chain
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00260
Glycine, serine and threonine metabolism
pop00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01230
Biosynthesis of amino acids
Module
pop_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
7472004
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
7472004
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
7472004
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
ThiG
NanE
Ribul_P_3_epim
FMN_dh
NMO
TMP-TENI
IGPS
Motif
Other DBs
NCBI-GeneID:
7472004
NCBI-ProteinID:
XP_002300807
UniProt:
B9GS77
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Position
2:2962287..2965364
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AA seq
310 aa
AA seq
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MAAALKSTPSFLQLKKPETHFLVRHKPTIVSTRRFAPMASLTAIRSLGIGETFSNLKKQG
KVALIPYITAGDPDLKTTAEALKVLDACGCDIIELGVPYSDPLADGPVIQAAATRSLARG
TNFEAITSMLREVVPQVSCPIALFTYYNPILKRGIEKFMSTVKDIGVHGLVVPDVPLEET
GVLRKEAVKNKLELVLLTTPTTPTERMKAIVEAADGFVYLVSSVGVTGARASVSDRVQTL
LRDIKESTTKPVAVGFGISKPEHVKQVAAWGADGVIVGSAMVKLLGEAKSPEEGLKELES
FTKSLKAALP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctctgaaatcaactccttccttcctccaactgaaaaaaccagagacccat
ttcctcgtccgtcacaaacccactatcgtttcaaccagaaggttcgcgccaatggcttct
ctcactgcaatccgaagtcttggcattggagaaacgttctccaatctcaaaaaacaaggc
aaagtggcgctcatcccatacatcacagctggtgatcctgatcttaaaaccacagcggaa
gccttgaaggtgctggacgcctgtggatgtgacataattgaactaggtgttccttactcc
gatcccctggcagatggtccggttatccaggcggcagctacacgctccttggctagaggg
accaattttgaagcgatcacatcaatgttaagggaggtcgttccacaagtatcctgtcca
attgctttatttacatattacaatccaattctaaagcgtggaattgagaagtttatgtcc
actgtaaaagacattggcgtacatggacttgtggtcccagatgttcctctggaggagact
ggagttctgaggaaggaagctgtcaagaataagcttgaactggtacttcttacaacgccc
actactcctacggaacgcatgaaagccattgttgaagcagcagatggatttgtgtatctt
gtgagctcagttggagttactggcgctcgtgcttctgtaagtgaccgagttcaaactctt
ctccgggatattaaagagtcaacaaccaagcctgtagctgttggctttggtatatcaaaa
cctgagcatgtcaagcaggttgcagcatggggtgctgatggtgtcattgttggtagtgcc
atggtgaagttgttgggtgaagcaaaatctcccgaggaaggattgaaggaactagagagt
ttcacgaaatctttaaaagctgcacttccttga
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