Populus trichocarpa (black cottonwood): 7477227
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Entry
7477227 CDS
T01077
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
7477227
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
7477227
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
7477227
NCBI-ProteinID:
XP_002315493
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Position
10:complement(710478..712525)
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AA seq
408 aa
AA seq
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MKSLANALLILCLLAASCEAKGLGRRAPAAISPRRTAPRRDPNEKVFNVLQYGAKPGGKQ
DSALSFIRAWRAACNYRGTARLLIPMGTFLIGATIFQGPCLGPVPIKVQIAGTLKAVPDP
SMYEEDFWILFENINGLLVTGTGTVDGQGNAVWKYNDGGSRFPSSIKFNHVANGIIRQIT
SVNPMGFHISIVLSQNIRAKHLHITAPATSPNTDGIHISQSSVVKVSRSVISTGDDCVAI
IQGSTDVSVKKVTCGPGHGFSVGSLGKYPDEKDVRGVVVTNCTLRNADNGVRIKTWGGSP
PSQASNILFQDIIMDNVKRPIIIDQTYGSKSNSPSRVKISDVRYINIRGTSASEVGVDLK
CSEAVPCEKLYFSNINLKYYGPKKLPFTSTCTNAKVNYVGNQFPPPCR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctttggcaaacgccctccttatcttgtgcttattagccgcctcttgtgaggca
aagggtctgggacgccgcgctcctgccgcaatatcacctcgccggaccgctcctagaaga
gacccgaatgaaaaggtcttcaacgtgttacagtacggagcaaaacctggaggaaaacag
gatagtgcattgtctttcatccgagcatggagggctgcatgcaattataggggaacggca
aggctacttatccccatgggaaccttcttgataggggcaactatcttccaaggaccatgc
ctaggtccagtacccattaaggttcaaattgcaggaacactgaaagctgtaccagaccct
agcatgtacgaagaagatttctggatcttgtttgaaaacatcaacggcttgctggttact
ggtacaggcactgttgatggccaaggcaatgctgtctggaaatacaacgacggtggttcc
aggttcccaagttctataaaattcaatcatgtagccaatgggattataagacagatcacc
tcggttaatcccatgggtttccacatatccatcgttctgtcccagaacatcagggcaaaa
catcttcatataacagctcctgcgacgagccccaataccgatggaatccatataagccaa
tccagtgtagtgaaagtatccagaagtgttatcagcaccggtgatgattgcgttgctata
attcaaggaagcaccgatgtcagcgttaaaaaggttacttgtgggcctggacatggcttc
agtgttggtagccttggcaagtaccctgatgaaaaggacgtgagaggagtcgtcgtgaca
aactgcacactaaggaacgctgacaatggagttagaatcaaaacatggggaggatcacca
ccaagccaggcttcaaacattcttttccaggatattatcatggacaacgttaaacgcccc
attattatcgatcaaacctatggatcaaaaagcaactcgccatcaagggtaaagatcagc
gatgttcgatacataaacatcagaggaacctccgcgtcagaggttggagtcgatcttaag
tgtagcgaggctgttccttgtgaaaaactttacttttcaaacatcaatttgaagtactat
gggccaaagaagctacctttcacttctacgtgtacgaatgcaaaagtcaactatgttggc
aaccaattcccaccaccttgtcgatag
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